1. Home
  2. Species
  3. Pleocnemia irregularis
  4. Sequence
  5. Pir_g11826

Pir_g11826


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g11826

Target Alias Description ECC score Gene Family Method Actions
Ala_g17273 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g38788 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene32466.t1 Aspi01Gene32466 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene36978.t1 Aspi01Gene36978 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g19307 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g67240 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g04600 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os07g44170.1 EMB2758, LOC_Os07g44170 Pentatricopeptide repeat-containing protein At4g33990... 0.03 OrthoFinder output from all 47 species
Len_g18932 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07406 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g28769 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g37918 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g07086 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g07515 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0153.g023530 CRR22 not classified & original description: CDS=1-2073 0.03 OrthoFinder output from all 47 species
Sam_g03180 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo103099 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.03 OrthoFinder output from all 47 species
Smo462 No alias Pentatricopeptide repeat-containing protein At3g03580... 0.02 OrthoFinder output from all 47 species
Spa_g33790 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005516 calmodulin binding IEP HCCA
BP GO:0006450 regulation of translational fidelity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
BP GO:0065008 regulation of biological quality IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 1085 1107
IPR002885 Pentatricopeptide_repeat 173 198
IPR002885 Pentatricopeptide_repeat 679 701
IPR002885 Pentatricopeptide_repeat 577 602
IPR002885 Pentatricopeptide_repeat 705 751
IPR002885 Pentatricopeptide_repeat 906 953
IPR002885 Pentatricopeptide_repeat 603 649
IPR002885 Pentatricopeptide_repeat 402 450
IPR002885 Pentatricopeptide_repeat 503 551
IPR002885 Pentatricopeptide_repeat 1009 1057
IPR002885 Pentatricopeptide_repeat 1111 1155
IPR002885 Pentatricopeptide_repeat 97 146
IPR002885 Pentatricopeptide_repeat 300 347
IPR002885 Pentatricopeptide_repeat 199 245
IPR002885 Pentatricopeptide_repeat 805 852
No external refs found!