1. Home
  2. Species
  3. Pleocnemia irregularis
  4. Sequence
  5. Pir_g12344

Pir_g12344 (GRP2, ATGRP2, GR-RBP2)


Aliases : GRP2, ATGRP2, GR-RBP2

Description : not classified & original description: none


Gene families : OG0000073 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000073_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g12344
Cluster HCCA: Cluster_223

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00013p00256900 GRP2, ATGRP2,... RNA processing.organelle machineries.RNA... 0.02 OrthoFinder output from all 47 species
AT2G37510 No alias RNA-binding (RRM/RBD/RNP motifs) family protein 0.02 OrthoFinder output from all 47 species
Adi_g021389 GR-RBP3 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g022268 GR-RBP3 RNA editing factor *(ORRM3) & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g117859 ATRZ-1A RNA chaperone *(RZ1) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g01618 No alias RNA chaperone *(RZ1) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g27510 CCR2, ATGRP7,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g04150 GRP2, ATGRP2, GR-RBP2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g01126 CCR2, ATGRP7,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g07242 GR-RBP4, GRP4 RNA editing factor *(ORRM3) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g29612 CCR2, ATGRP7,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene18654.t1 GR-RBP3, Aspi01Gene18654 RNA editing factor *(ORRM3) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0006.g009790 CCR2, ATGRP7,... not classified & original description: CDS=136-657 0.03 OrthoFinder output from all 47 species
Azfi_s0008.g011258 CCR2, ATGRP7,... not classified & original description: CDS=99-740 0.02 OrthoFinder output from all 47 species
Cba_g01674 GRP2, ATGRP2, GR-RBP2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g04821 No alias RNA chaperone *(RZ1) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g27479 CCR2, ATGRP7,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.30G070400.1 CCR2, ATGRP7,... not classified & original description: pacid=50608368... 0.02 OrthoFinder output from all 47 species
Ceric.35G013000.1 GR-RBP3, Ceric.35G013000 RNA editing factor *(ORRM3) & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.35G013300.1 GR-RBP3, Ceric.35G013300 RNA editing factor *(ORRM3) & original description:... 0.03 OrthoFinder output from all 47 species
Cre01.g032300 PAB2, PABP2, ATPAB2 No description available 0.01 OrthoFinder output from all 47 species
Dac_g09825 GR-RBP4, GRP4 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g10484 GR-RBP4, GRP4 RNA editing factor *(ORRM3) & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g24341 CCR2, ATGRP7,... not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g00165 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g52563 CCR2, ATGRP7,... not classified & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01025527001 No alias Organelle RRM domain-containing protein 2, mitochondrial... 0.01 OrthoFinder output from all 47 species
GSVIVT01033666001 No alias Glycine-rich RNA-binding protein RZ1B OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
LOC_Os07g08960.1 LOC_Os07g08960 RNA chaperone (RZ1|GR-RBP) 0.02 OrthoFinder output from all 47 species
Len_g06168 CCR2, ATGRP7,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g02645 CCR2, ATGRP7,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g21135 CCR2, ATGRP7,... not classified & original description: none 0.01 OrthoFinder output from all 47 species
Lfl_g24303 CCR2, ATGRP7,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g25551 GRP2, ATGRP2, GR-RBP2 not classified & original description: none 0.01 OrthoFinder output from all 47 species
MA_9594430g0010 No alias RNA chaperone (RZ1|GR-RBP) 0.01 OrthoFinder output from all 47 species
Mp2g24130.1 CCR2, ATGRP7,... RNA chaperone (RZ1|GR-RBP) 0.03 OrthoFinder output from all 47 species
Msp_g12851 CCR2, ATGRP7,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g46058 CCR2, ATGRP7,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g09551 No alias RNA chaperone *(RZ1) & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g10789 CCR2, ATGRP7,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g16425 CCR2, ATGRP7,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g18834 No alias RNA chaperone *(RZ1) & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g26099 CCR2, ATGRP7,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g32569 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g30959 GR-RBP4, GRP4 RNA editing factor *(ORRM3) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g57632 CCR2, ATGRP7,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g14736 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g25482 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g36205 No alias RNA chaperone *(RZ1) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g38660 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g22222 GRP2, ATGRP2, GR-RBP2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g22687 CCR2, ATGRP7,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g46397 GR-RBP4, GRP4 RNA editing factor *(ORRM3) & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g30660 GR-RBP3 RNA ediTing factor *(ORRM3) & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e012278_P001 Zm00001e012278 RNA chaperone (RZ1|GR-RBP) 0.03 OrthoFinder output from all 47 species
Zm00001e028481_P002 GRP2, ATGRP2,... RNA chaperone (RZ1|GR-RBP). RNA editing factor (ORRM) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0008652 amino acid biosynthetic process IEP HCCA
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 38 108
No external refs found!