Aliases : CRR22
Description : not classified & original description: none
Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s03531p00004900 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At3g02330,... | 0.03 | OrthoFinder output from all 47 species | |
| AT2G33760 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| AT3G14730 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g004975 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g008203 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g010668 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g014779 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g015420 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g016117 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g035684 | CRR22 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g036683 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g036821 | EMB2758 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g060301 | REME1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g067920 | CRR2 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g069197 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g101277 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g28189 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g38516 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g06767 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g07147 | EMB2758 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g13814 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g21347 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g26977 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g27809 | MEF21 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g27896 | OTP84 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g03841 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g09162 | CRR22 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene07542.t2 | Aspi01Gene07542 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0003.g007695 | No alias | not classified & original description: CDS=1-2262 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0005.g008963 | No alias | not classified & original description: CDS=1-2157 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0010.g012363 | No alias | not classified & original description: CDS=1-2442 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0054.g033714 | CRR22 | not classified & original description: CDS=1-1803 | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g29632 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.02G054700.1 | Ceric.02G054700 | not classified & original description: pacid=50584211... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.24G026700.1 | Ceric.24G026700 | not classified & original description: pacid=50628649... | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g35078 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g16902 | EMB2261 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ehy_g17702 | OSB1 | ssDNA-binding protein *(OSB) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01009974001 | No alias | Pentatricopeptide repeat-containing protein At3g26540... | 0.03 | OrthoFinder output from all 47 species | |
| Len_g18573 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g18597 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g06697 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g07668 | OTP82 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g17264 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| MA_38395g0010 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g14847 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g16922 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g20280 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Msp_g45693 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g07857 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g16027 | REME1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g19044 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g20489 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g24069 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g30381 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g37890 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g04329 | LPA66 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pnu_g22600 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g07564 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g13340 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g31859 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g33128 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g39260 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g59303 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0019.g007750 | No alias | not classified & original description: CDS=1-1920 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0019.g007959 | No alias | not classified & original description: CDS=1692-4925 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0095.g019259 | No alias | not classified & original description: CDS=1-1518 | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g08102 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g10447 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g19760 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g29293 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g52092 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Smo75659 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.03 | OrthoFinder output from all 47 species | |
| Smo89588 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g15468 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g20189 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g17636 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Tin_g31398 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g31404 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g35678 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g44315 | CRR22 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000096 | sulfur amino acid metabolic process | IEP | HCCA |
| BP | GO:0000097 | sulfur amino acid biosynthetic process | IEP | HCCA |
| CC | GO:0005575 | cellular_component | IEP | HCCA |
| CC | GO:0005737 | cytoplasm | IEP | HCCA |
| CC | GO:0005759 | mitochondrial matrix | IEP | HCCA |
| BP | GO:0006399 | tRNA metabolic process | IEP | HCCA |
| BP | GO:0006400 | tRNA modification | IEP | HCCA |
| BP | GO:0006534 | cysteine metabolic process | IEP | HCCA |
| BP | GO:0006535 | cysteine biosynthetic process from serine | IEP | HCCA |
| BP | GO:0006563 | L-serine metabolic process | IEP | HCCA |
| BP | GO:0006790 | sulfur compound metabolic process | IEP | HCCA |
| BP | GO:0008033 | tRNA processing | IEP | HCCA |
| MF | GO:0008374 | O-acyltransferase activity | IEP | HCCA |
| BP | GO:0008652 | amino acid biosynthetic process | IEP | HCCA |
| MF | GO:0009001 | serine O-acetyltransferase activity | IEP | HCCA |
| BP | GO:0009069 | serine family amino acid metabolic process | IEP | HCCA |
| BP | GO:0009070 | serine family amino acid biosynthetic process | IEP | HCCA |
| BP | GO:0009451 | RNA modification | IEP | HCCA |
| BP | GO:0016053 | organic acid biosynthetic process | IEP | HCCA |
| MF | GO:0016407 | acetyltransferase activity | IEP | HCCA |
| MF | GO:0016412 | serine O-acyltransferase activity | IEP | HCCA |
| MF | GO:0016413 | O-acetyltransferase activity | IEP | HCCA |
| MF | GO:0016747 | acyltransferase activity, transferring groups other than amino-acyl groups | IEP | HCCA |
| BP | GO:0019344 | cysteine biosynthetic process | IEP | HCCA |
| CC | GO:0031974 | membrane-enclosed lumen | IEP | HCCA |
| BP | GO:0034227 | tRNA thio-modification | IEP | HCCA |
| BP | GO:0034470 | ncRNA processing | IEP | HCCA |
| BP | GO:0034660 | ncRNA metabolic process | IEP | HCCA |
| CC | GO:0043233 | organelle lumen | IEP | HCCA |
| BP | GO:0044272 | sulfur compound biosynthetic process | IEP | HCCA |
| BP | GO:0046394 | carboxylic acid biosynthetic process | IEP | HCCA |
| CC | GO:0070013 | intracellular organelle lumen | IEP | HCCA |
| CC | GO:0110165 | cellular anatomical entity | IEP | HCCA |
| BP | GO:1901605 | alpha-amino acid metabolic process | IEP | HCCA |
| BP | GO:1901607 | alpha-amino acid biosynthetic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 472 | 518 |
| IPR002885 | Pentatricopeptide_repeat | 446 | 470 |
| IPR002885 | Pentatricopeptide_repeat | 344 | 367 |
| IPR002885 | Pentatricopeptide_repeat | 547 | 570 |
| IPR002885 | Pentatricopeptide_repeat | 269 | 316 |
| IPR002885 | Pentatricopeptide_repeat | 371 | 417 |
| IPR002885 | Pentatricopeptide_repeat | 168 | 215 |
| IPR002885 | Pentatricopeptide_repeat | 66 | 114 |
| IPR046848 | E_motif | 589 | 651 |
| No external refs found! |
