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  5. Pir_g12576

Pir_g12576


Description : not classified & original description: none


Gene families : OG0000255 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000255_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g12576

Target Alias Description ECC score Gene Family Method Actions
Als_g15964 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g29005 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g18487 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0682.g082037 No alias not classified & original description: CDS=1-1575 0.01 OrthoFinder output from all 47 species
Ceric.01G106900.1 Ceric.01G106900 not classified & original description: pacid=50592915... 0.03 OrthoFinder output from all 47 species
Ceric.08G052600.1 Ceric.08G052600 not classified & original description: pacid=50638471... 0.05 OrthoFinder output from all 47 species
Ceric.13G032100.1 Ceric.13G032100 not classified & original description: pacid=50635670... 0.05 OrthoFinder output from all 47 species
Ceric.1Z097000.1 Ceric.1Z097000 not classified & original description: pacid=50640979... 0.04 OrthoFinder output from all 47 species
Ceric.32G008500.1 Ceric.32G008500 not classified & original description: pacid=50597752... 0.02 OrthoFinder output from all 47 species
Dcu_g04874 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g07712 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g36406 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_17193 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os01g27740.3 LOC_Os01g27740 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os02g30620.3 LOC_Os02g30620 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os03g28310.1 LOC_Os03g28310 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os04g31940.1 LOC_Os04g31940 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os11g36960.1 LOC_Os11g36960 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Len_g13912 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10434613g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp1g27530.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Nbi_g02424 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g42147 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g08915 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g19617 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0011.g005157 No alias not classified & original description: CDS=1-1251 0.03 OrthoFinder output from all 47 species
Sam_g08458 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g50190 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g098250.4.1 Solyc01g098250 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc03g007280.4.1 Solyc03g007280 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc05g040050.3.1 Solyc05g040050 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc07g047690.1.1 Solyc07g047690 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc08g005300.3.1 Solyc08g005300 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e017660_P001 Zm00001e017660 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e022589_P001 Zm00001e022589 no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Zm00001e040755_P001 Zm00001e040755 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e041002_P001 Zm00001e041002 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e041003_P001 Zm00001e041003 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0004045 aminoacyl-tRNA hydrolase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0010181 FMN binding IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
MF GO:0061630 ubiquitin protein ligase activity IEP HCCA
MF GO:0061659 ubiquitin-like protein ligase activity IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
InterPro domains Description Start Stop
IPR001623 DnaJ_domain 67 128
IPR024593 DUF3444 556 760
No external refs found!