Pir_g12581 (WRKY4)

Aliases : WRKY4

Description : WRKY-type transcription factor & original description: none

Gene families : OG0000020 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Pir_g12581
Cluster	HCCA: Cluster_233

Target	Alias	Description	ECC score	Gene Family Method
Adi_g021146	WRKY26	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Als_g20798	ATWRKY45, WRKY45	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Als_g30728	WRKY2, ATWRKY2	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Als_g32004	ATWRKY24, WRKY24	WRKY-type transcription factor & original description: none	0.01	OrthoFinder output from all 47 species
Als_g42426	ATWRKY24, WRKY24	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g60353	WRKY23, ATWRKY23	WRKY-type transcription factor & original description: none	0.01	OrthoFinder output from all 47 species
Cba_g26774	WRKY6, ATWRKY6	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Cba_g27210	WRKY6, ATWRKY6	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ceric.02G075500.1	ATWRKY71,...	WRKY-type transcription factor & original description:...	0.03	OrthoFinder output from all 47 species
Dde_g05926	AtWRKY20, WRKY20	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g11987	WRKY31, ATWRKY31	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g20799	WRKY33, ATWRKY33	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g30999	ATWRKY71, WRKY71	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Gb_26411	WRKY28, ATWRKY28	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
Gb_31953	WRKY4	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
Lfl_g05639	WRKY4	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Lfl_g08941	AtWRKY20, WRKY20	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Mp8g10640.1	WRKY4	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Msp_g06292	ATWRKY24, WRKY24	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Nbi_g22081	No alias	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Pir_g14502	No alias	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Pir_g15530	WRKY4	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g18275	ATWRKY24, WRKY24	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g63386	ATWRKY71, WRKY71	WRKY-type transcription factor & original description: none	0.01	OrthoFinder output from all 47 species
Sacu_v1.1_s0024.g009066	WRKY33, ATWRKY33	WRKY-type transcription factor & original description: CDS=9-1697	0.02	OrthoFinder output from all 47 species
Sam_g18765	No alias	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g16962	WRKY4	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Spa_g22580	WRKY48, ATWRKY48	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g37056	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g51917	No alias	A1-class (Pepsin) protease & original description: none	0.02	OrthoFinder output from all 47 species
Tin_g32456	ATWRKY71, WRKY71	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000160	phosphorelay signal transduction system	IEP	HCCA
MF	GO:0003690	double-stranded DNA binding	IEP	HCCA
MF	GO:0003697	single-stranded DNA binding	IEP	HCCA
MF	GO:0003723	RNA binding	IEP	HCCA
MF	GO:0003916	DNA topoisomerase activity	IEP	HCCA
MF	GO:0003918	DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity	IEP	HCCA
BP	GO:0006265	DNA topological change	IEP	HCCA
BP	GO:0006952	defense response	IEP	HCCA
BP	GO:0006996	organelle organization	IEP	HCCA
MF	GO:0008094	ATP-dependent activity, acting on DNA	IEP	HCCA
BP	GO:0035556	intracellular signal transduction	IEP	HCCA
BP	GO:0051276	chromosome organization	IEP	HCCA
BP	GO:0071103	DNA conformation change	IEP	HCCA
MF	GO:0140097	catalytic activity, acting on DNA	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003657	WRKY_dom	311	367
IPR003657	WRKY_dom	482	538

External Links

No external refs found!

Pir_g12581 (WRKY4)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation