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  5. Pir_g12590

Pir_g12590 (ATTAP1, TAP1)


Aliases : ATTAP1, TAP1

Description : subfamily ABCB transporter & original description: none


Gene families : OG0001464 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001464_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g12590

Target Alias Description ECC score Gene Family Method Actions
Aob_g09025 ATTAP1, TAP1 subfamily ABCB transporter & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g00756 ATTAP1, TAP1 subfamily ABCB transporter & original description: none 0.07 OrthoFinder output from all 47 species
Dac_g00952 ATTAP1, TAP1 subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g08509 ATTAP1, TAP1 subfamily ABCB transporter & original description: none 0.05 OrthoFinder output from all 47 species
Gb_35052 ATTAP1, TAP1 subfamily ABCB transporter 0.04 OrthoFinder output from all 47 species
LOC_Os01g68330.1 ATTAP1, TAP1,... subfamily ABCB transporter 0.05 OrthoFinder output from all 47 species
Mp1g18530.1 ATTAP1, TAP1 subfamily ABCB transporter 0.03 OrthoFinder output from all 47 species
Msp_g36543 ATTAP1, TAP1 subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Solyc12g070270.2.1 ATTAP1, TAP1,... subfamily ABCB transporter 0.04 OrthoFinder output from all 47 species
Tin_g03501 ATTAP1, TAP1 subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e018873_P003 ATTAP1, TAP1,... subfamily ABCB transporter 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
MF GO:0071949 FAD binding IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
MF GO:2001070 starch binding IEP HCCA
InterPro domains Description Start Stop
IPR011527 ABC1_TM_dom 163 425
IPR003439 ABC_transporter-like_ATP-bd 496 644
No external refs found!