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  5. Pir_g12959

Pir_g12959


Description : substrate adaptor *(ARKP1) of SCF E3 ubiquitin ligase complex & original description: none


Gene families : OG0000497 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000497_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g12959
Cluster HCCA: Cluster_238

Target Alias Description ECC score Gene Family Method Actions
AT2G02870 No alias Galactose oxidase/kelch repeat superfamily protein 0.02 OrthoFinder output from all 47 species
Azfi_s0179.g056297 No alias substrate adaptor *(ARKP1) of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Cba_g13106 No alias substrate adaptor *(ARKP1) of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Dac_g16747 No alias substrate adaptor *(ARKP1) of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Ehy_g06855 No alias substrate adaptor *(ARKP1) of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
MA_53263g0010 No alias F-box/kelch-repeat protein At5g60570 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Msp_g42693 No alias substrate adaptor *(ARKP1) of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Smo14013 No alias F-box/kelch-repeat protein At3g27150 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Spa_g39886 No alias substrate adaptor *(ARKP1) of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003746 translation elongation factor activity IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
BP GO:0006417 regulation of translation IEP HCCA
BP GO:0006448 regulation of translational elongation IEP HCCA
BP GO:0006449 regulation of translational termination IEP HCCA
BP GO:0006813 potassium ion transport IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0009891 positive regulation of biosynthetic process IEP HCCA
BP GO:0009893 positive regulation of metabolic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0010557 positive regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0010604 positive regulation of macromolecule metabolic process IEP HCCA
BP GO:0010608 post-transcriptional regulation of gene expression IEP HCCA
BP GO:0010628 positive regulation of gene expression IEP HCCA
MF GO:0015079 potassium ion transmembrane transporter activity IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
BP GO:0017182 peptidyl-diphthamide metabolic process IEP HCCA
BP GO:0017183 peptidyl-diphthamide biosynthetic process from peptidyl-histidine IEP HCCA
BP GO:0018202 peptidyl-histidine modification IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031325 positive regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0031328 positive regulation of cellular biosynthetic process IEP HCCA
BP GO:0034248 regulation of amide metabolic process IEP HCCA
BP GO:0034250 positive regulation of amide metabolic process IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
MF GO:0043021 ribonucleoprotein complex binding IEP HCCA
MF GO:0043022 ribosome binding IEP HCCA
BP GO:0043243 positive regulation of protein-containing complex disassembly IEP HCCA
BP GO:0043244 regulation of protein-containing complex disassembly IEP HCCA
MF GO:0044877 protein-containing complex binding IEP HCCA
BP GO:0045727 positive regulation of translation IEP HCCA
BP GO:0045901 positive regulation of translational elongation IEP HCCA
BP GO:0045905 positive regulation of translational termination IEP HCCA
BP GO:0048518 positive regulation of biological process IEP HCCA
BP GO:0048522 positive regulation of cellular process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
MF GO:0051087 chaperone binding IEP HCCA
BP GO:0051128 regulation of cellular component organization IEP HCCA
BP GO:0051130 positive regulation of cellular component organization IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051173 positive regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051246 regulation of protein metabolic process IEP HCCA
BP GO:0051247 positive regulation of protein metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0071805 potassium ion transmembrane transport IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0090560 2-(3-amino-3-carboxypropyl)histidine synthase activity IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
BP GO:1900247 regulation of cytoplasmic translational elongation IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR006652 Kelch_1 281 330
IPR006652 Kelch_1 333 377
No external refs found!