Pir_g13245


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g13245

Target Alias Description ECC score Gene Family Method Actions
AT4G18520 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g002365 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g002735 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g005707 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g005749 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g015988 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g036766 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g043194 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g047468 LPA66 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g34516 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g42810 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g13785 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g24374 MEF19 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g24714 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g33780 DOT4 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g36194 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g02978 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g04861 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g06880 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g07162 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Als_g15782 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g18332 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g19303 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30289 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30821 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g33141 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g57869 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g09828 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g16161 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g27010 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g04175 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g04207 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g06971 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g16165 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g16170 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g16783 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g28650 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g29262 PTAC9, OSB2 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene34780.t1 Aspi01Gene34780 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0001.g000688 No alias not classified & original description: CDS=1-3246 0.06 OrthoFinder output from all 47 species
Azfi_s0005.g009022 No alias not classified & original description: CDS=1-2334 0.08 OrthoFinder output from all 47 species
Azfi_s0009.g011917 No alias not classified & original description: CDS=1-393 0.06 OrthoFinder output from all 47 species
Azfi_s0090.g042774 No alias not classified & original description: CDS=1-2433 0.06 OrthoFinder output from all 47 species
Azfi_s0098.g043939 EMB2758 not classified & original description: CDS=1-1746 0.05 OrthoFinder output from all 47 species
Cba_g03404 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g07268 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g15519 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g29672 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g35056 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g35120 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.02G054200.1 Ceric.02G054200 not classified & original description: pacid=50585961... 0.04 OrthoFinder output from all 47 species
Ceric.04G059600.1 Ceric.04G059600 not classified & original description: pacid=50632178... 0.05 OrthoFinder output from all 47 species
Ceric.05G026100.1 Ceric.05G026100 not classified & original description: pacid=50577264... 0.03 OrthoFinder output from all 47 species
Ceric.06G036400.1 Ceric.06G036400 not classified & original description: pacid=50619976... 0.03 OrthoFinder output from all 47 species
Ceric.07G009100.1 Ceric.07G009100 not classified & original description: pacid=50626585... 0.04 OrthoFinder output from all 47 species
Ceric.10G028900.1 Ceric.10G028900 not classified & original description: pacid=50613320... 0.03 OrthoFinder output from all 47 species
Ceric.11G015500.1 Ceric.11G015500 not classified & original description: pacid=50594992... 0.03 OrthoFinder output from all 47 species
Ceric.14G064000.1 Ceric.14G064000 not classified & original description: pacid=50634231... 0.04 OrthoFinder output from all 47 species
Ceric.14G077900.1 Ceric.14G077900 not classified & original description: pacid=50634382... 0.05 OrthoFinder output from all 47 species
Ceric.18G060200.1 Ceric.18G060200 not classified & original description: pacid=50621585... 0.03 OrthoFinder output from all 47 species
Ceric.19G049000.1 Ceric.19G049000 not classified & original description: pacid=50576332... 0.04 OrthoFinder output from all 47 species
Ceric.20G008800.1 Ceric.20G008800 not classified & original description: pacid=50566037... 0.05 OrthoFinder output from all 47 species
Ceric.22G042200.1 Ceric.22G042200 not classified & original description: pacid=50614742... 0.06 OrthoFinder output from all 47 species
Ceric.22G064700.1 Ceric.22G064700 not classified & original description: pacid=50614857... 0.03 OrthoFinder output from all 47 species
Ceric.25G017100.1 OTP86, Ceric.25G017100 not classified & original description: pacid=50593496... 0.04 OrthoFinder output from all 47 species
Ceric.26G020400.1 Ceric.26G020400 not classified & original description: pacid=50600093... 0.03 OrthoFinder output from all 47 species
Ceric.26G057900.1 CRR22, Ceric.26G057900 not classified & original description: pacid=50598962... 0.03 OrthoFinder output from all 47 species
Ceric.27G011000.1 Ceric.27G011000 not classified & original description: pacid=50605840... 0.04 OrthoFinder output from all 47 species
Ceric.29G051600.1 Ceric.29G051600 not classified & original description: pacid=50625199... 0.03 OrthoFinder output from all 47 species
Ceric.29G082000.1 Ceric.29G082000 not classified & original description: pacid=50625862... 0.06 OrthoFinder output from all 47 species
Ceric.30G032300.1 Ceric.30G032300 not classified & original description: pacid=50608635... 0.03 OrthoFinder output from all 47 species
Ceric.38G050100.1 OTP84, Ceric.38G050100 not classified & original description: pacid=50580323... 0.03 OrthoFinder output from all 47 species
Ceric.39G028600.1 Ceric.39G028600 not classified & original description: pacid=50582938... 0.03 OrthoFinder output from all 47 species
Dac_g05750 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g09743 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g16781 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g23630 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g08380 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g14936 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g21209 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g32689 CRR22 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dcu_g36959 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g38668 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g40963 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g44152 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g44643 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g45946 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g50116 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g19229 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01008407001 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.06 OrthoFinder output from all 47 species
GSVIVT01032950001 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.03 OrthoFinder output from all 47 species
Len_g03912 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g04246 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g04288 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g05397 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g05421 CRR22 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Len_g09782 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g12311 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g15531 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g17358 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g17363 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g18251 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g18566 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18978 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g21523 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g21876 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g22995 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g26317 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g29179 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g29951 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g31001 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g43886 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g44429 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g54669 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g59331 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06151 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g07789 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g15182 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g22363 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g23050 OTP85 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g33253 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g12985 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g13341 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g20568 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g23052 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g26925 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g40957 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g45693 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g13705 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g22141 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g23742 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g24911 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g01804 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g12878 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g16678 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g17400 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g20288 REME1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g21891 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g25355 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g32012 OSB1 ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g40875 OTP82 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g02568 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g08536 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g13332 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g57688 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g03873 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g15731 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g22120 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g01386 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g05208 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g05218 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g05340 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g06358 MEF19 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g09510 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g12193 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g13105 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g13846 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g18601 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g22244 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g29289 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g29785 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g30405 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g31176 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g32088 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g33120 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g39273 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g41679 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g43104 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g44900 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g45354 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g52632 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53393 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g53976 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g55201 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g57817 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g61155 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g63206 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0010.g004955 No alias not classified & original description: CDS=1-2634 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0014.g006149 No alias not classified & original description: CDS=1-2199 0.03 OrthoFinder output from all 47 species
Sam_g02656 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g19760 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo109721 No alias Pentatricopeptide repeat-containing protein At3g63370,... 0.02 OrthoFinder output from all 47 species
Smo123298 OTP84 Pentatricopeptide repeat-containing protein At1g11290,... 0.02 OrthoFinder output from all 47 species
Smo136241 EMB2758 Pentatricopeptide repeat-containing protein At2g13600... 0.04 OrthoFinder output from all 47 species
Smo82255 CRR2 Pentatricopeptide repeat-containing protein At4g33990... 0.1 OrthoFinder output from all 47 species
Solyc01g095160.3.1 Solyc01g095160 Pentatricopeptide repeat-containing protein At4g37170... 0.03 OrthoFinder output from all 47 species
Solyc05g023900.1.1 Solyc05g023900 Putative pentatricopeptide repeat-containing protein... 0.04 OrthoFinder output from all 47 species
Solyc06g048900.1.1 Solyc06g048900 Pentatricopeptide repeat-containing protein At2g40720... 0.04 OrthoFinder output from all 47 species
Spa_g55591 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g04725 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g05657 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g06283 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g16954 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g20127 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g22906 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g22992 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g23114 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g27280 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g30037 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g30348 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g30444 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g31074 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g31184 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g31666 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g34663 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g44228 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e012422_P001 OSB1, Zm00001e012422 ssDNA-binding protein (OSB) 0.03 OrthoFinder output from all 47 species
Zm00001e014800_P001 OTP82, Zm00001e014800 Pentatricopeptide repeat-containing protein At2g29760,... 0.03 OrthoFinder output from all 47 species
Zm00001e019971_P001 Zm00001e019971 Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
Zm00001e030553_P001 Zm00001e030553 Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0008150 biological_process IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0051259 protein complex oligomerization IEP HCCA
BP GO:0051260 protein homooligomerization IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 21 69
IPR002885 Pentatricopeptide_repeat 123 171
No external refs found!