1. Home
  2. Species
  3. Pleocnemia irregularis
  4. Sequence
  5. Pir_g13293

Pir_g13293 (TRX P, TRX z)


Aliases : TRX P, TRX z

Description : cofactor of plastid-encoded RNA polymerase *(PAP10/TrxZ) & original description: none


Gene families : OG0002657 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002657_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g13293
Cluster HCCA: Cluster_5

Target Alias Description ECC score Gene Family Method Actions
Aob_g00880 TRX P, TRX z cofactor of plastid-encoded RNA polymerase *(PAP10/TrxZ)... 0.03 OrthoFinder output from all 47 species
Aob_g41899 TRX P, TRX z cofactor of plastid-encoded RNA polymerase *(PAP10/TrxZ)... 0.02 OrthoFinder output from all 47 species
Aspi01Gene22299.t1 TRX P, TRX z,... cofactor of plastid-encoded RNA polymerase *(PAP10/TrxZ)... 0.05 OrthoFinder output from all 47 species
Ceric.36G062900.1 TRX P, TRX z,... cofactor of plastid-encoded RNA polymerase *(PAP10/TrxZ)... 0.02 OrthoFinder output from all 47 species
Dac_g01998 TRX P, TRX z cofactor of plastid-encoded RNA polymerase *(PAP10/TrxZ)... 0.04 OrthoFinder output from all 47 species
Dcu_g15316 TRX P, TRX z cofactor of plastid-encoded RNA polymerase *(PAP10/TrxZ)... 0.07 OrthoFinder output from all 47 species
GSVIVT01036664001 TRX P, TRX z RNA biosynthesis.organelle machineries.RNA polymerase... 0.02 OrthoFinder output from all 47 species
Gb_29029 TRX P, TRX z Z-type thioredoxin. PAP10/TrxZ cofactor of... 0.02 OrthoFinder output from all 47 species
LOC_Os08g29110.1 TRX P, TRX z,... Z-type thioredoxin. PAP10/TrxZ cofactor of... 0.02 OrthoFinder output from all 47 species
Msp_g12051 TRX P, TRX z cofactor of plastid-encoded RNA polymerase *(PAP10/TrxZ)... 0.06 OrthoFinder output from all 47 species
Pp3c4_27660V3.1 TRX P, TRX z, Pp3c4_27660 Thioredoxin z 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004177 aminopeptidase activity IEP HCCA
MF GO:0004366 glycerol-3-phosphate O-acyltransferase activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0006766 vitamin metabolic process IEP HCCA
BP GO:0006767 water-soluble vitamin metabolic process IEP HCCA
BP GO:0006771 riboflavin metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008235 metalloexopeptidase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
MF GO:0008374 O-acyltransferase activity IEP HCCA
MF GO:0008686 3,4-dihydroxy-2-butanone-4-phosphate synthase activity IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009110 vitamin biosynthetic process IEP HCCA
BP GO:0009231 riboflavin biosynthetic process IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0042364 water-soluble vitamin biosynthetic process IEP HCCA
BP GO:0042726 flavin-containing compound metabolic process IEP HCCA
BP GO:0042727 flavin-containing compound biosynthetic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
MF GO:0070006 metalloaminopeptidase activity IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR013766 Thioredoxin_domain 64 166
No external refs found!