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  5. Pir_g13350

Pir_g13350


Description : protein involved in PS-II assembly *(HHL1) & original description: none


Gene families : OG0006939 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006939_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g13350

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00049p00073250 evm_27.TU.AmTr_v1... Photosynthesis.photophosphorylation.photosystem... 0.02 OrthoFinder output from all 47 species
AT1G67700 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.03 OrthoFinder output from all 47 species
Adi_g033649 No alias protein involved in PS-II assembly *(HHL1) & original... 0.07 OrthoFinder output from all 47 species
Ala_g07520 No alias protein involved in PS-II assembly *(HHL1) & original... 0.03 OrthoFinder output from all 47 species
Als_g00467 No alias protein involved in PS-II assembly *(HHL1) & original... 0.06 OrthoFinder output from all 47 species
Aob_g06998 No alias protein involved in PS-II assembly *(HHL1) & original... 0.05 OrthoFinder output from all 47 species
Aop_g06739 No alias protein involved in PS-II assembly *(HHL1) & original... 0.03 OrthoFinder output from all 47 species
Cba_g10861 No alias protein involved in PS-II assembly *(HHL1) & original... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020710.126 No alias No description available 0.01 OrthoFinder output from all 47 species
Cre03.g146167 No alias Photosynthesis.photophosphorylation.photosystem... 0.03 OrthoFinder output from all 47 species
Dac_g16635 No alias protein involved in PS-II assembly *(HHL1) & original... 0.03 OrthoFinder output from all 47 species
Dcu_g31028 No alias protein involved in PS-II assembly *(HHL1) & original... 0.09 OrthoFinder output from all 47 species
Dde_g43832 No alias protein involved in PS-II assembly *(HHL1) & original... 0.09 OrthoFinder output from all 47 species
Ehy_g04373 No alias protein involved in PS-II assembly *(HHL1) & original... 0.02 OrthoFinder output from all 47 species
Gb_36498 No alias HHL1 protein involved in PS-II assembly 0.04 OrthoFinder output from all 47 species
LOC_Os02g38820.1 LOC_Os02g38820 HHL1 protein involved in PS-II assembly 0.02 OrthoFinder output from all 47 species
Len_g53688 No alias protein involved in PS-II assembly *(HHL1) & original... 0.04 OrthoFinder output from all 47 species
Lfl_g05888 No alias protein involved in PS-II assembly *(HHL1) & original... 0.04 OrthoFinder output from all 47 species
MA_99789g0010 No alias HHL1 protein involved in PS-II assembly 0.04 OrthoFinder output from all 47 species
Mp4g20930.1 No alias HHL1 protein involved in PS-II assembly 0.03 OrthoFinder output from all 47 species
Msp_g02701 No alias protein involved in PS-II assembly *(HHL1) & original... 0.03 OrthoFinder output from all 47 species
Nbi_g12181 No alias protein involved in PS-II assembly *(HHL1) & original... 0.03 OrthoFinder output from all 47 species
Ore_g28473 No alias protein involved in PS-II assembly *(HHL1) & original... 0.04 OrthoFinder output from all 47 species
Pnu_g10877 No alias protein involved in PS-II assembly *(HHL1) & original... 0.03 OrthoFinder output from all 47 species
Ppi_g54816 No alias protein involved in PS-II assembly *(HHL1) & original... 0.02 OrthoFinder output from all 47 species
Sam_g09632 No alias protein involved in PS-II assembly *(HHL1) & original... 0.03 OrthoFinder output from all 47 species
Smo403146 No alias Photosynthesis.photophosphorylation.photosystem... 0.02 OrthoFinder output from all 47 species
Solyc05g014310.3.1 Solyc05g014310 HHL1 protein involved in PS-II assembly 0.05 OrthoFinder output from all 47 species
Zm00001e015029_P001 Zm00001e015029 HHL1 protein involved in PS-II assembly 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0010277 chlorophyllide a oxygenase [overall] activity IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP HCCA
MF GO:0016730 oxidoreductase activity, acting on iron-sulfur proteins as donors IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0030163 protein catabolic process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0031072 heat shock protein binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR045388 HHL1-like 72 202
No external refs found!