Pir_g13386


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g13386

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00049p00223290 evm_27.TU.AmTr_v1... Putative pentatricopeptide repeat-containing protein... 0.05 OrthoFinder output from all 47 species
AMTR_s00170p00032020 OTP86,... Pentatricopeptide repeat-containing protein At5g16860... 0.05 OrthoFinder output from all 47 species
AT1G77170 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.05 OrthoFinder output from all 47 species
Adi_g011562 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g036585 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g057083 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g101037 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g13568 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g18165 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g16398 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g36208 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g36521 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g37181 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g05112 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06396 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07519 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g09212 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g20490 EMB2261 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g26499 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g59203 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g08949 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g23980 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g33115 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g33597 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g67889 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g01506 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g05302 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g07724 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g13545 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g29784 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g34636 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g42618 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.03G008600.1 Ceric.03G008600 not classified & original description: pacid=50571724... 0.04 OrthoFinder output from all 47 species
Ceric.09G066700.1 Ceric.09G066700 not classified & original description: pacid=50588343... 0.04 OrthoFinder output from all 47 species
Ceric.10G043800.1 Ceric.10G043800 not classified & original description: pacid=50613534... 0.04 OrthoFinder output from all 47 species
Ceric.18G049100.1 Ceric.18G049100 not classified & original description: pacid=50621467... 0.06 OrthoFinder output from all 47 species
Ceric.20G003600.1 Ceric.20G003600 not classified & original description: pacid=50567008... 0.04 OrthoFinder output from all 47 species
Ceric.20G048700.1 CRR22, Ceric.20G048700 not classified & original description: pacid=50567179... 0.05 OrthoFinder output from all 47 species
Ceric.26G058400.1 VAC1, ECB2,... not classified & original description: pacid=50598871... 0.05 OrthoFinder output from all 47 species
Ceric.28G068900.1 Ceric.28G068900 not classified & original description: pacid=50570286... 0.04 OrthoFinder output from all 47 species
Ceric.29G070600.1 Ceric.29G070600 not classified & original description: pacid=50625806... 0.04 OrthoFinder output from all 47 species
Ceric.31G032600.1 CRR22, Ceric.31G032600 not classified & original description: pacid=50574071... 0.04 OrthoFinder output from all 47 species
Ceric.35G030500.1 Ceric.35G030500 not classified & original description: pacid=50580789... 0.04 OrthoFinder output from all 47 species
Ceric.36G060000.1 Ceric.36G060000 not classified & original description: pacid=50568455... 0.06 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000851.30 No alias Pentatricopeptide repeat-containing protein At5g61990,... 0.01 OrthoFinder output from all 47 species
Dac_g04671 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g05656 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g06637 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g13278 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g18724 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g30123 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g43765 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g43782 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g45699 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g13254 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g25879 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g26818 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g05686 REME1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g05750 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g22173 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g14557 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01008015001 No alias Pentatricopeptide repeat-containing protein At1g74600,... 0.03 OrthoFinder output from all 47 species
GSVIVT01028819001 No alias Pentatricopeptide repeat-containing protein At5g52850,... 0.04 OrthoFinder output from all 47 species
GSVIVT01036169001 No alias Pentatricopeptide repeat-containing protein At2g27610... 0.03 OrthoFinder output from all 47 species
GSVIVT01036975001 EMB2758 Pentatricopeptide repeat-containing protein At4g33990... 0.04 OrthoFinder output from all 47 species
Len_g03385 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g04331 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g04746 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g05143 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g05403 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g17743 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g17998 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18885 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g44422 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g54971 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g35996 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g38215 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_95507g0010 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
Msp_g04440 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g22641 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g28108 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g28769 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g41095 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g16039 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g33192 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g34904 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g41304 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g03426 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g14311 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g57719 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g04533 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g15319 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g16657 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g19854 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g05328 No alias not classified & original description: none 0.11 OrthoFinder output from all 47 species
Ppi_g56263 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0089.g018685 No alias not classified & original description: CDS=1-1332 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0100.g019636 No alias not classified & original description: CDS=1-303 0.04 OrthoFinder output from all 47 species
Sam_g12585 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g38738 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g20180 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g23932 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g24048 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g25363 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g32763 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g55549 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g04160 OTP86 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g17627 DOT4 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Tin_g28558 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Tin_g43994 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g45519 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004176 ATP-dependent peptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 339 366
IPR002885 Pentatricopeptide_repeat 60 107
IPR002885 Pentatricopeptide_repeat 264 311
IPR002885 Pentatricopeptide_repeat 162 209
No external refs found!