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  5. Pir_g13620

Pir_g13620


Description : regulatory protein *(CMU) of microtubule-dependent CSC insertion & original description: none


Gene families : OG0000703 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000703_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g13620

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00045p00046500 evm_27.TU.AmTr_v1... Protein KINESIN LIGHT CHAIN-RELATED 3 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AT3G27960 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020675.32 No alias No description available 0.01 OrthoFinder output from all 47 species
Dcu_g07135 No alias regulatory protein *(CMU) of microtubule-dependent CSC... 0.04 OrthoFinder output from all 47 species
LOC_Os02g01960.1 LOC_Os02g01960 regulatory protein (CMU) of microtubule-dependent CSC insertion 0.02 OrthoFinder output from all 47 species
LOC_Os02g47880.1 LOC_Os02g47880 regulatory protein (CMU) of microtubule-dependent CSC insertion 0.02 OrthoFinder output from all 47 species
Lfl_g27290 No alias regulatory protein *(CMU) of microtubule-dependent CSC... 0.03 OrthoFinder output from all 47 species
Mp6g16080.1 No alias regulatory protein (CMU) of microtubule-dependent CSC insertion 0.02 OrthoFinder output from all 47 species
Pnu_g07257 No alias regulatory protein *(CMU) of microtubule-dependent CSC... 0.02 OrthoFinder output from all 47 species
Sam_g19488 No alias regulatory protein *(CMU) of microtubule-dependent CSC... 0.03 OrthoFinder output from all 47 species
Solyc08g008460.2.1 Solyc08g008460 regulatory protein (CMU) of microtubule-dependent CSC insertion 0.03 OrthoFinder output from all 47 species
Spa_g04349 No alias regulatory protein *(CMU) of microtubule-dependent CSC... 0.03 OrthoFinder output from all 47 species
Zm00001e023340_P002 Zm00001e023340 regulatory protein (CMU) of microtubule-dependent CSC insertion 0.04 OrthoFinder output from all 47 species
Zm00001e025391_P001 Zm00001e025391 regulatory protein (CMU) of microtubule-dependent CSC insertion 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000226 microtubule cytoskeleton organization IEP HCCA
MF GO:0003872 6-phosphofructokinase activity IEP HCCA
CC GO:0005856 cytoskeleton IEP HCCA
CC GO:0005885 Arp2/3 protein complex IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006096 glycolytic process IEP HCCA
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006165 nucleoside diphosphate phosphorylation IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
BP GO:0006757 ATP generation from ADP IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
BP GO:0007015 actin filament organization IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007051 spindle organization IEP HCCA
MF GO:0008443 phosphofructokinase activity IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
BP GO:0009132 nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0019200 carbohydrate kinase activity IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0031023 microtubule organizing center organization IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0034314 Arp2/3 complex-mediated actin nucleation IEP HCCA
BP GO:0045010 actin nucleation IEP HCCA
BP GO:0046031 ADP metabolic process IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0046939 nucleotide phosphorylation IEP HCCA
BP GO:0051225 spindle assembly IEP HCCA
BP GO:0070925 organelle assembly IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
BP GO:0097435 supramolecular fiber organization IEP HCCA
BP GO:0140694 non-membrane-bounded organelle assembly IEP HCCA
InterPro domains Description Start Stop
IPR019734 TPR_repeat 515 543
IPR041617 TPR_MalT 608 833
No external refs found!