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  5. Pir_g14486

Pir_g14486 (ATMBD6, MBD6)


Aliases : ATMBD6, MBD6

Description : methylation reader *(MBD5-6) & original description: none


Gene families : OG0000559 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000559_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g14486

Target Alias Description ECC score Gene Family Method Actions
Adi_g008918 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g019651 MBD05, MBD5, ATMBD5 methylation reader *(MBD5-6) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene67878.t1 MBD05, MBD5,... methylation reader *(MBD5-6) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g11942 MBD05, MBD5, ATMBD5 methylation reader *(MBD5-6) & original description: none 0.04 OrthoFinder output from all 47 species
Len_g12263 MBD05, MBD5, ATMBD5 methylation reader *(MBD5-6) & original description: none 0.03 OrthoFinder output from all 47 species
Len_g23111 MBD05, MBD5, ATMBD5 methylation reader *(MBD5-6) & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g29243 MBD05, MBD5, ATMBD5 methylation reader *(MBD5-6) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g09712 No alias methylation reader *(MBD5-6) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g26548 No alias methylation reader *(MBD5-6) & original description: none 0.02 OrthoFinder output from all 47 species
Solyc03g025970.3.1 MBD13, Solyc03g025970 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Spa_g05751 ATMBD6, MBD6 methylation reader *(MBD5-6) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004645 1,4-alpha-oligoglucan phosphorylase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
MF GO:0008184 glycogen phosphorylase activity IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
InterPro domains Description Start Stop
IPR001739 Methyl_CpG_DNA-bd 353 409
No external refs found!