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  5. Pir_g15165

Pir_g15165 (GLR3.3, ATGLR3.3)


Aliases : GLR3.3, ATGLR3.3

Description : ligand-gated cation channel *(GLR) & original description: none


Gene families : OG0000075 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000075_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g15165
Cluster HCCA: Cluster_226

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00062p00050250 GLUR3, GLR3.4,... Solute transport.channels.GLR ligand-gated cation channel 0.04 OrthoFinder output from all 47 species
Aev_g43014 GLR3.6, ATGLR3.6 ligand-gated cation channel *(GLR) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g04471 GLR3.3, ATGLR3.3 ligand-gated cation channel *(GLR) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g14361 GLUR3, GLR3.4, ATGLR3.4 ligand-gated cation channel *(GLR) & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g14918 GLR3.3, ATGLR3.3 ligand-gated cation channel *(GLR) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g38137 ATGLR3.2,... ligand-gated cation channel *(GLR) & original description: none 0.04 OrthoFinder output from all 47 species
Als_g52489 GLR3.3, ATGLR3.3 ligand-gated cation channel *(GLR) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g29978 GLR3.3, ATGLR3.3 ligand-gated cation channel *(GLR) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene54268.t1 GLUR3, GLR3.4,... ligand-gated cation channel *(GLR) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g12380 GLR3.3, ATGLR3.3 ligand-gated cation channel *(GLR) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g76037 GLR3.3, ATGLR3.3 ligand-gated cation channel *(GLR) & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g12536 GLR3.3, ATGLR3.3 ligand-gated cation channel *(GLR) & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g19469 GLR3.3, ATGLR3.3 ligand-gated cation channel *(GLR) & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01021159001 GLR2.7, ATGLR2.7 Solute transport.channels.GLR ligand-gated cation channel 0.02 OrthoFinder output from all 47 species
LOC_Os06g09090.1 GLR2.8,... ligand-gated cation channel (GLR) 0.03 OrthoFinder output from all 47 species
Len_g00747 GLR3.3, ATGLR3.3 ligand-gated cation channel *(GLR) & original description: none 0.04 OrthoFinder output from all 47 species
Len_g30718 GLR3.3, ATGLR3.3 ligand-gated cation channel *(GLR) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g15694 ATGLR3.5, GLR6, GLR3.5 ligand-gated cation channel *(GLR) & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g12407 GLR3.3, ATGLR3.3 ligand-gated cation channel *(GLR) & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g40693 GLR2.7, ATGLR2.7 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g39598 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g44056 GLR3.3, ATGLR3.3 ligand-gated cation channel *(GLR) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g61341 GLR3.3, ATGLR3.3 ligand-gated cation channel *(GLR) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g30122 GLUR3, GLR3.4, ATGLR3.4 ligand-gated cation channel *(GLR) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g40451 GLR3.3, ATGLR3.3 ligand-gated cation channel *(GLR) & original description: none 0.03 OrthoFinder output from all 47 species
Solyc02g082480.3.1 GLR3.6,... ligand-gated cation channel (GLR) 0.03 OrthoFinder output from all 47 species
Spa_g22526 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g31279 ATGLR3.1, GLR2,... ligand-gated cation channel *(GLR) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0015276 ligand-gated monoatomic ion channel activity IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
BP GO:0006720 isoprenoid metabolic process IEP HCCA
BP GO:0006721 terpenoid metabolic process IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0008299 isoprenoid biosynthetic process IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
MF GO:0008685 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity IEP HCCA
BP GO:0016114 terpenoid biosynthetic process IEP HCCA
BP GO:0016485 protein processing IEP HCCA
MF GO:0016849 phosphorus-oxygen lyase activity IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
BP GO:0071586 CAAX-box protein processing IEP HCCA
InterPro domains Description Start Stop
IPR001320 Iontro_rcpt_C 821 851
IPR001638 Solute-binding_3/MltF_N 500 820
IPR001828 ANF_lig-bd_rcpt 54 412
No external refs found!