1. Home
  2. Species
  3. Pleocnemia irregularis
  4. Sequence
  5. Pir_g15234

Pir_g15234


Description : regulatory protein *(UBA1/2) of UBP1 activity & original description: none


Gene families : OG0008736 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008736_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g15234

Target Alias Description ECC score Gene Family Method Actions
Ala_g13549 No alias regulatory protein *(UBA1/2) of UBP1 activity & original... 0.03 OrthoFinder output from all 47 species
Aop_g06478 UBA2A regulatory protein *(UBA1/2) of UBP1 activity & original... 0.04 OrthoFinder output from all 47 species
Aop_g12203 No alias regulatory protein *(UBA1/2) of UBP1 activity & original... 0.03 OrthoFinder output from all 47 species
Ceric.05G072300.1 Ceric.05G072300 regulatory protein *(UBA1/2) of UBP1 activity & original... 0.04 OrthoFinder output from all 47 species
Ceric.10G042100.1 Ceric.10G042100 regulatory protein *(UBA1/2) of UBP1 activity & original... 0.06 OrthoFinder output from all 47 species
Dac_g07665 No alias regulatory protein *(UBA1/2) of UBP1 activity & original... 0.03 OrthoFinder output from all 47 species
Nbi_g07419 No alias regulatory protein *(UBA1/2) of UBP1 activity & original... 0.04 OrthoFinder output from all 47 species
Spa_g04832 No alias regulatory protein *(UBA1/2) of UBP1 activity & original... 0.04 OrthoFinder output from all 47 species
Spa_g06021 No alias regulatory protein *(UBA1/2) of UBP1 activity & original... 0.04 OrthoFinder output from all 47 species
Tin_g03206 No alias regulatory protein *(UBA1/2) of UBP1 activity & original... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
BP GO:0010206 photosystem II repair IEP HCCA
BP GO:0010207 photosystem II assembly IEP HCCA
BP GO:0030091 protein repair IEP HCCA
MF GO:0032182 ubiquitin-like protein binding IEP HCCA
MF GO:0043130 ubiquitin binding IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 68 134
IPR000504 RRM_dom 172 240
No external refs found!