Pir_g15530 (WRKY4)

Aliases : WRKY4

Description : WRKY-type transcription factor & original description: none

Gene families : OG0000020 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Pir_g15530

Target	Alias	Description	ECC score	Gene Family Method
Adi_g086848	WRKY33, ATWRKY33	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g105053	ATWRKY30, WRKY30	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ala_g05188	ATWRKY50, WRKY50	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aob_g28221	WRKY4	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Aop_g25566	ATWRKY57, WRKY57	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g60353	WRKY23, ATWRKY23	WRKY-type transcription factor & original description: none	0.08	OrthoFinder output from all 47 species
Cba_g38597	WRKY3	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Dac_g26985	No alias	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Dcu_g44250	WRKY6, ATWRKY6	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Dde_g05926	AtWRKY20, WRKY20	WRKY-type transcription factor & original description: none	0.05	OrthoFinder output from all 47 species
Len_g28971	ATWRKY24, WRKY24	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Lfl_g05639	WRKY4	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Msp_g06292	ATWRKY24, WRKY24	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Nbi_g05882	WRKY4	WRKY-type transcription factor & original description: none	0.05	OrthoFinder output from all 47 species
Ore_g09070	ATWRKY71, WRKY71	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g10933	WRKY31, ATWRKY31	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Ore_g16460	WRKY3	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g19872	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g12581	WRKY4	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g14502	No alias	WRKY-type transcription factor & original description: none	0.09	OrthoFinder output from all 47 species
Pir_g18275	ATWRKY24, WRKY24	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g63386	ATWRKY71, WRKY71	WRKY-type transcription factor & original description: none	0.07	OrthoFinder output from all 47 species
Pnu_g17624	WRKY3	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Pnu_g20596	AtWRKY20, WRKY20	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Pnu_g33322	WRKY4	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g03208	WRKY3	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0018.g007361	WRKY28, ATWRKY28	WRKY-type transcription factor & original description: CDS=1-303	0.03	OrthoFinder output from all 47 species
Sam_g08167	No alias	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Sam_g32808	No alias	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g16962	WRKY4	WRKY-type transcription factor & original description: none	0.07	OrthoFinder output from all 47 species
Tin_g03844	No alias	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0005634	nucleus	IEP	HCCA
CC	GO:0043227	membrane-bounded organelle	IEP	HCCA
CC	GO:0043231	intracellular membrane-bounded organelle	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003657	WRKY_dom	478	534
IPR003657	WRKY_dom	290	344

External Links

No external refs found!

Pir_g15530 (WRKY4)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation