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  5. Pir_g15629

Pir_g15629 (CML42)


Aliases : CML42

Description : calcium sensor *(CML) & original description: none


Gene families : OG0000205 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000205_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g15629
Cluster HCCA: Cluster_7

Target Alias Description ECC score Gene Family Method Actions
Adi_g017795 UNE14 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g08071 CML43 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g02922 UNE14 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g13274 CML42 calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene06369.t1 Aspi01Gene06369 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene06372.t1 UNE14, Aspi01Gene06372 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene06373.t1 UNE14, Aspi01Gene06373 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene34632.t1 CML42, Aspi01Gene34632 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene34640.t1 CML42, Aspi01Gene34640 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene34662.t1 CML42, Aspi01Gene34662 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0143.g051443 UNE14 calcium sensor *(CML) & original description: CDS=1-462 0.02 OrthoFinder output from all 47 species
Ceric.04G109000.1 CML43, Ceric.04G109000 calcium sensor *(CML) & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.17G067000.1 Ceric.17G067000 not classified & original description: pacid=50618804... 0.02 OrthoFinder output from all 47 species
Ceric.35G008400.1 CML42, Ceric.35G008400 calcium sensor *(CML) & original description:... 0.03 OrthoFinder output from all 47 species
Dac_g12957 UNE14 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g29729 CML42 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g00701 CML43 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g16054 UNE14 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g41575 UNE14 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Gb_28443 UNE14 Calmodulin-like protein 2 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
MA_8749g0010 CML43 Calcium-binding protein CML42 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Msp_g29580 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g14285 UNE14 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g08284 UNE14 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g09124 UNE14 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Solyc09g055880.1.1 AGD11, Solyc09g055880 Calmodulin-like protein 3 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Spa_g49928 UNE14 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e001557_P001 CML42, Zm00001e001557 Probable calcium-binding protein CML27 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 215 285
IPR002048 EF_hand_dom 119 141
No external refs found!