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  5. Pir_g15809

Pir_g15809 (ATATG2, ATG2)


Aliases : ATATG2, ATG2

Description : component *(ATG2) of autophagosome ATG9-2-18 membrane shuttling complex & original description: none


Gene families : OG0003168 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003168_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g15809

Target Alias Description ECC score Gene Family Method Actions
AT3G19190 ATATG2, ATG2 autophagy 2 0.04 OrthoFinder output from all 47 species
Cba_g11381 ATATG2, ATG2 component *(ATG2) of autophagosome ATG9-2-18 membrane... 0.02 OrthoFinder output from all 47 species
Ceric.01G052200.1 ATATG2, ATG2,... component *(ATG2) of autophagosome ATG9-2-18 membrane... 0.05 OrthoFinder output from all 47 species
Cre09.g408950 ATATG2, ATG2 No description available 0.02 OrthoFinder output from all 47 species
GSVIVT01031759001 ATATG2, ATG2 Vesicle trafficking.autophagosome formation.ATG9-2-18... 0.04 OrthoFinder output from all 47 species
Gb_39311 ATATG2, ATG2 component ATG2 of autophagosome ATG9-2-18 membrane... 0.03 OrthoFinder output from all 47 species
LOC_Os06g15700.1 ATATG2, ATG2,... component ATG2 of autophagosome ATG9-2-18 membrane... 0.03 OrthoFinder output from all 47 species
Lfl_g07446 ATATG2, ATG2 component *(ATG2) of autophagosome ATG9-2-18 membrane... 0.03 OrthoFinder output from all 47 species
MA_10433793g0020 ATATG2, ATG2 component ATG2 of autophagosome ATG9-2-18 membrane... 0.02 OrthoFinder output from all 47 species
Mp6g18570.1 ATATG2, ATG2 component ATG2 of autophagosome ATG9-2-18 membrane... 0.02 OrthoFinder output from all 47 species
Msp_g20277 ATATG2, ATG2 component *(ATG2) of autophagosome ATG9-2-18 membrane... 0.03 OrthoFinder output from all 47 species
Sam_g11595 No alias component *(ATG2) of autophagosome ATG9-2-18 membrane... 0.03 OrthoFinder output from all 47 species
Spa_g47522 ATATG2, ATG2 component *(ATG2) of autophagosome ATG9-2-18 membrane... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP HCCA
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP HCCA
BP GO:0000398 mRNA splicing, via spliceosome IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
InterPro domains Description Start Stop
IPR015412 Atg2/VPS13_C 1872 1962
IPR026854 VPS13-like_N 22 123
IPR026885 ATG2_mid_RBG 1209 1278
No external refs found!