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  5. Pir_g15851

Pir_g15851


Description : not classified & original description: none


Gene families : OG0000526 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000526_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g15851
Cluster HCCA: Cluster_30

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00257810 evm_27.TU.AmTr_v1... Remorin OS=Solanum tuberosum 0.04 OrthoFinder output from all 47 species
Adi_g107606 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aop_g01121 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g70234 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0129.g048972 No alias not classified & original description: CDS=564-1205 0.06 OrthoFinder output from all 47 species
Ceric.04G101900.1 Ceric.04G101900 not classified & original description: pacid=50631891... 0.03 OrthoFinder output from all 47 species
Ceric.06G045700.1 Ceric.06G045700 not classified & original description: pacid=50619672... 0.03 OrthoFinder output from all 47 species
Ceric.33G027200.1 Ceric.33G027200 not classified & original description: pacid=50607254... 0.06 OrthoFinder output from all 47 species
Dcu_g02391 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g34282 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g12268 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dde_g48279 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01019785001 No alias Remorin OS=Solanum tuberosum 0.03 OrthoFinder output from all 47 species
LOC_Os10g36000.1 LOC_Os10g36000 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Nbi_g05160 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g16515 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g24501 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g41173 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g06625 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g08904 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g60948 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g48237 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo428235 No alias No description available 0.02 OrthoFinder output from all 47 species
Solyc05g048820.3.1 Solyc05g048820 Remorin OS=Solanum tuberosum (sp|p93788|remo_soltu : 94.0) 0.02 OrthoFinder output from all 47 species
Solyc10g017540.4.1 Solyc10g017540 Remorin OS=Solanum tuberosum (sp|p93788|remo_soltu : 95.1) 0.03 OrthoFinder output from all 47 species
Spa_g00381 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g08097 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g38180 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g47427 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e000088_P001 Zm00001e000088 Remorin OS=Solanum tuberosum (sp|p93788|remo_soltu : 97.1) 0.01 OrthoFinder output from all 47 species
Zm00001e015240_P001 Zm00001e015240 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0004096 catalase activity IEP HCCA
MF GO:0004451 isocitrate lyase activity IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016833 oxo-acid-lyase activity IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
InterPro domains Description Start Stop
IPR005516 Remorin_C 106 208
No external refs found!