Aliases : ATL5
Description : RING-H2-class ATL-subclass E3 ubiquitin ligase & original description: none
Gene families : OG0000008 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Pir_g15928 | |
| Cluster | HCCA: Cluster_59 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00002p00198340 | evm_27.TU.AmTr_v1... | Protein degradation.peptide tagging.Ubiquitin... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00021p00161170 | ATL2, TL2,... | Protein degradation.peptide tagging.Ubiquitin... | 0.04 | OrthoFinder output from all 47 species | |
| AMTR_s00044p00211560 | evm_27.TU.AmTr_v1... | Protein degradation.peptide tagging.Ubiquitin... | 0.02 | OrthoFinder output from all 47 species | |
| AMTR_s00049p00223430 | evm_27.TU.AmTr_v1... | Protein degradation.peptide tagging.Ubiquitin... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00102p00069840 | evm_27.TU.AmTr_v1... | Protein degradation.peptide tagging.Ubiquitin... | 0.05 | OrthoFinder output from all 47 species | |
| AT1G23980 | No alias | RING/U-box superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g15196 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g05267 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.06 | OrthoFinder output from all 47 species | |
| Ala_g13299 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g22077 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| Als_g00547 | BRH1 | E3 ubiquitin ligase *(BRH) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g07858 | ATL2, TL2 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g04240 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g06027 | ATL6 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g16135 | RHA3A | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g16315 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.05 | OrthoFinder output from all 47 species | |
| Aop_g24368 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g36854 | BRH1 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aop_g60107 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene00937.t1 | BRH1, Aspi01Gene00937 | E3 ubiquitin ligase *(BRH) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene16999.t2 | ATL6, Aspi01Gene16999 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.05 | OrthoFinder output from all 47 species | |
| Aspi01Gene16999.t3 | ATL2, TL2,... | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene36586.t1 | Aspi01Gene36586 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene37205.t2 | Aspi01Gene37205 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene41078.t1 | Aspi01Gene41078 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene49237.t1 | ATL2, TL2,... | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene56880.t1 | Aspi01Gene56880 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene70935.t1 | ATL6, Aspi01Gene70935 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0048.g030554 | No alias | not classified & original description: CDS=1-690 | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0091.g042816 | No alias | not classified & original description: CDS=1-813 | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0385.g067521 | RHA3B | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.07G057800.1 | ATL6, Ceric.07G057800 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.09G083100.1 | Ceric.09G083100 | not classified & original description: pacid=50587896... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.09G083300.1 | Ceric.09G083300 | not classified & original description: pacid=50586861... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.09G083800.1 | Ceric.09G083800 | not classified & original description: pacid=50587862... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.12G062900.1 | ATL2, TL2,... | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.13G057600.1 | Ceric.13G057600 | not classified & original description: pacid=50636796... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.18G057500.1 | Ceric.18G057500 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.21G001200.1 | Ceric.21G001200 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.22G020900.1 | ATL43, Ceric.22G020900 | not classified & original description: pacid=50614198... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.22G061600.1 | ATL2, TL2,... | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.29G080000.1 | ATL31, CNI1,... | not classified & original description: pacid=50625053... | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g07458 | ATL2, TL2 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g14773 | ATL31, CNI1 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g33447 | MEE16 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Dcu_g40176 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g49887 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dde_g09730 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dde_g25304 | ATL43 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g40050 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.06 | OrthoFinder output from all 47 species | |
| Dde_g48934 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ehy_g06688 | MEE16 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g26130 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g29562 | ATL2, TL2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01009098001 | No alias | Protein degradation.peptide tagging.Ubiquitin... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01012022001 | No alias | Protein degradation.peptide tagging.Ubiquitin... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01032684001 | No alias | Protein degradation.peptide tagging.Ubiquitin... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os01g20930.1 | ATL3, LOC_Os01g20930 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os01g60730.2 | LOC_Os01g60730 | RING-H2 finger protein ATL72 OS=Arabidopsis thaliana... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os02g15100.1 | ATL2, TL2, LOC_Os02g15100 | RING-H2 finger protein ATL40 OS=Arabidopsis thaliana... | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os02g52210.1 | ATL31, CNI1,... | RING-H2-class E3 ligase | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os05g15170.1 | ATL63, TL63,... | RING-H2-class E3 ligase | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os05g29676.1 | LOC_Os05g29676 | RING-H2-class E3 ligase | 0.06 | OrthoFinder output from all 47 species | |
| LOC_Os05g29710.1 | LOC_Os05g29710 | RING-H2-class E3 ligase | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os05g36310.1 | LOC_Os05g36310 | RING-H2 finger protein ATL77 OS=Arabidopsis thaliana... | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os05g39260.1 | LOC_Os05g39260 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os06g34560.1 | ATL43, LOC_Os06g34560 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os06g34620.1 | LOC_Os06g34620 | RING-H2-class E3 ligase | 0.02 | OrthoFinder output from all 47 species | |
| Len_g00544 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.04 | OrthoFinder output from all 47 species | |
| Len_g29571 | BRH1 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Len_g59507 | ATL2, TL2 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g04047 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.04 | OrthoFinder output from all 47 species | |
| MA_10200587g0010 | No alias | RING-H2-class E3 ligase | 0.03 | OrthoFinder output from all 47 species | |
| MA_17390g0010 | No alias | RING-H2-class E3 ligase | 0.03 | OrthoFinder output from all 47 species | |
| MA_177673g0010 | ATL2, TL2 | RING-H2-class E3 ligase | 0.04 | OrthoFinder output from all 47 species | |
| MA_226198g0010 | No alias | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| MA_43543g0010 | ATL2, TL2 | RING-H2-class E3 ligase | 0.03 | OrthoFinder output from all 47 species | |
| MA_6934973g0010 | No alias | RING-H2-class E3 ligase | 0.03 | OrthoFinder output from all 47 species | |
| MA_8362328g0010 | XERICO | Probable E3 ubiquitin-protein ligase XERICO... | 0.04 | OrthoFinder output from all 47 species | |
| MA_85088g0010 | No alias | RING-H2-class E3 ligase | 0.03 | OrthoFinder output from all 47 species | |
| MA_8693914g0010 | No alias | RING-H2 finger protein ATL73 OS=Arabidopsis thaliana... | 0.03 | OrthoFinder output from all 47 species | |
| Mp4g04600.1 | No alias | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g11890 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g12500 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g25202 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Msp_g28489 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g36004 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.08 | OrthoFinder output from all 47 species | |
| Msp_g36822 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g14075 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.07 | OrthoFinder output from all 47 species | |
| Ore_g05275 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g09567 | BRH1 | E3 ubiquitin ligase *(BRH) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g28691 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g29694 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g40735 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g01265 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.07 | OrthoFinder output from all 47 species | |
| Pir_g02769 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.1 | OrthoFinder output from all 47 species | |
| Pir_g15924 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g18035 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g23741 | ATL2, TL2 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g44351 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.05 | OrthoFinder output from all 47 species | |
| Pir_g63952 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pnu_g01184 | BRH1 | E3 ubiquitin ligase *(BRH) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g02738 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Ppi_g26079 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g46048 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g54811 | ATL2, TL2 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0039.g012209 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0062.g015449 | No alias | not classified & original description: CDS=1-711 | 0.04 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0102.g019911 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| Smo412606 | No alias | Protein degradation.peptide tagging.Ubiquitin... | 0.04 | OrthoFinder output from all 47 species | |
| Smo417984 | No alias | No description available | 0.04 | OrthoFinder output from all 47 species | |
| Smo96631 | No alias | Protein degradation.peptide tagging.Ubiquitin... | 0.04 | OrthoFinder output from all 47 species | |
| Solyc03g123690.1.1 | Solyc03g123690 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| Solyc04g009780.1.1 | Solyc04g009780 | Putative RING-H2 finger protein ATL71 OS=Arabidopsis... | 0.06 | OrthoFinder output from all 47 species | |
| Solyc06g051250.1.1 | Solyc06g051250 | RING-H2-class E3 ligase | 0.04 | OrthoFinder output from all 47 species | |
| Solyc09g010650.1.1 | Solyc09g010650 | RING-H2 finger protein ATL33 OS=Arabidopsis thaliana... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc10g009487.1.1 | Solyc10g009487 | RING-H2 finger protein ATL20 OS=Arabidopsis thaliana... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc10g011880.1.1 | Solyc10g011880 | RING-H2-class E3 ligase | 0.05 | OrthoFinder output from all 47 species | |
| Solyc11g005280.1.1 | Solyc11g005280 | RING-H2-class E3 ligase | 0.04 | OrthoFinder output from all 47 species | |
| Solyc11g007530.2.1 | Solyc11g007530 | RING-H2-class E3 ligase | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g09499 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g10479 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g16818 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g17343 | ATL6 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.06 | OrthoFinder output from all 47 species | |
| Spa_g42318 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Tin_g26609 | XERICO | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Tin_g31919 | BRH1 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e007157_P001 | Zm00001e007157 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e007957_P001 | ATL6, Zm00001e007957 | RING-H2-class E3 ligase | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e015470_P001 | ATL8, Zm00001e015470 | RING-H2-class E3 ligase | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e017959_P001 | Zm00001e017959 | RING-H2 finger protein ATL70 OS=Arabidopsis thaliana... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e019438_P001 | Zm00001e019438 | RING-H2 finger protein ATL72 OS=Arabidopsis thaliana... | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e023234_P001 | BRH1, Zm00001e023234 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e023238_P001 | Zm00001e023238 | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e030136_P001 | Zm00001e030136 | RING-H2-class E3 ligase | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e034025_P001 | RHA3A, Zm00001e034025 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e034469_P001 | XERICO, Zm00001e034469 | ubiquitin protein ligase (XERICO) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e039314_P001 | Zm00001e039314 | RING-H2-class E3 ligase | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e041385_P001 | Zm00001e041385 | RING-H2-class E3 ligase | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001841 | Znf_RING | 117 | 160 |
| No external refs found! |
