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  5. Pir_g16442

Pir_g16442


Description : E3 ubiquitin ligase *(RFI2) & original description: none


Gene families : OG0000823 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000823_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g16442

Target Alias Description ECC score Gene Family Method Actions
Ala_g10129 No alias E3 ubiquitin ligase *(RFI2) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.06G016400.1 RFI2, Ceric.06G016400 E3 ubiquitin ligase *(RFI2) & original description:... 0.02 OrthoFinder output from all 47 species
Dde_g06464 No alias E3 ubiquitin ligase *(RFI2) & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0014.g006330 No alias E3 ubiquitin ligase *(RFI2) & original description: CDS=1-1536 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0050.g013828 RFI2 E3 ubiquitin ligase *(RFI2) & original description: CDS=264-1613 0.03 OrthoFinder output from all 47 species
Sam_g28755 No alias E3 ubiquitin ligase *(RFI2) & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g04661 No alias E3 ubiquiTin ligase *(RFI2) & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
BP GO:0016226 iron-sulfur cluster assembly IEP HCCA
BP GO:0016485 protein processing IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0031163 metallo-sulfur cluster assembly IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
BP GO:0071586 CAAX-box protein processing IEP HCCA
InterPro domains Description Start Stop
IPR001841 Znf_RING 20 65
No external refs found!