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  5. Pir_g16554

Pir_g16554 (REME1)


Aliases : REME1

Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g16554
Cluster HCCA: Cluster_48

Target Alias Description ECC score Gene Family Method Actions
Adi_g003294 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g004298 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g07273 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g48329 OSB3 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g11071 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g12477 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g13499 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g17191 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g23719 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g24046 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g24667 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g18971 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g04255 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g16384 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene02568.t1 Aspi01Gene02568 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene14860.t1 Aspi01Gene14860 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene20467.t1 EMB2758, Aspi01Gene20467 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene25991.t2 Aspi01Gene25991 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene27915.t1 Aspi01Gene27915 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene43949.t2 OTP84, Aspi01Gene43949 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene46609.t1 CRR22, Aspi01Gene46609 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene49892.t1 Aspi01Gene49892 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene54043.t1 Aspi01Gene54043 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene62647.t1 Aspi01Gene62647 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene65602.t1 Aspi01Gene65602 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0040.g026628 No alias not classified & original description: CDS=1-2499 0.03 OrthoFinder output from all 47 species
Azfi_s0063.g035332 No alias not classified & original description: CDS=1-1728 0.03 OrthoFinder output from all 47 species
Azfi_s0292.g063377 OTP86 not classified & original description: CDS=1-2337 0.02 OrthoFinder output from all 47 species
Cba_g06947 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g07050 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g19714 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20438 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g29589 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g36071 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.09G032600.1 Ceric.09G032600 not classified & original description: pacid=50587514... 0.02 OrthoFinder output from all 47 species
Ceric.16G016300.1 Ceric.16G016300 not classified & original description: pacid=50589149... 0.03 OrthoFinder output from all 47 species
Ceric.21G010300.1 Ceric.21G010300 not classified & original description: pacid=50603707... 0.02 OrthoFinder output from all 47 species
Dac_g03990 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g19035 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g19091 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g31776 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g36655 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g42994 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g11021 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g16810 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g17265 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g21350 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g26231 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g26859 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g38690 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g43279 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g45927 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g46395 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g49048 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g49904 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g05757 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g07125 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g08457 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g09519 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g16081 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g21664 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g23999 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g26041 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g41493 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g46554 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g49684 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g03880 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g04783 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g11419 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g12704 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18788 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Len_g26486 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g37832 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g54327 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g54495 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g14701 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g37653 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g17711 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g22512 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g27922 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g28517 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g28772 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g36814 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g38951 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g48726 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g04978 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g06220 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g06328 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g06820 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g13749 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g17079 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g20342 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g22117 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g14351 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g63890 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g03458 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g27693 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g05244 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g05293 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g05592 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g06358 MEF19 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g07588 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g09801 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g11526 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g18936 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g29583 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g41988 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g44678 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g52997 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53718 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53937 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53950 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g61252 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g03385 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g07845 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g12066 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g12390 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g15980 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g29713 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g30171 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g30281 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g32958 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g39881 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g40724 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g081110.4.1 SLO1, Solyc01g081110 Pentatricopeptide repeat-containing protein At1g08070,... 0.03 OrthoFinder output from all 47 species
Solyc01g097670.4.1 EMB2261, Solyc01g097670 RNA editing factor (ECD1) 0.03 OrthoFinder output from all 47 species
Solyc03g006990.1.1 Solyc03g006990 Pentatricopeptide repeat-containing protein At5g66520... 0.02 OrthoFinder output from all 47 species
Spa_g01102 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g56533 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g04193 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g05654 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g11396 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g17148 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g17618 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g23271 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g24821 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g24828 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g27411 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e011875_P001 OTP85, Zm00001e011875 RNA editing factor (OTP85) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006497 protein lipidation IEP HCCA
BP GO:0006505 GPI anchor metabolic process IEP HCCA
BP GO:0006506 GPI anchor biosynthetic process IEP HCCA
BP GO:0006643 membrane lipid metabolic process IEP HCCA
BP GO:0006644 phospholipid metabolic process IEP HCCA
BP GO:0006650 glycerophospholipid metabolic process IEP HCCA
BP GO:0006661 phosphatidylinositol biosynthetic process IEP HCCA
BP GO:0006664 glycolipid metabolic process IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
BP GO:0008654 phospholipid biosynthetic process IEP HCCA
BP GO:0009247 glycolipid biosynthetic process IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP HCCA
MF GO:0016670 oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor IEP HCCA
MF GO:0016972 thiol oxidase activity IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0045017 glycerolipid biosynthetic process IEP HCCA
BP GO:0046467 membrane lipid biosynthetic process IEP HCCA
BP GO:0046474 glycerophospholipid biosynthetic process IEP HCCA
BP GO:0046486 glycerolipid metabolic process IEP HCCA
BP GO:0046488 phosphatidylinositol metabolic process IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1903509 liposaccharide metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 74 102
IPR002885 Pentatricopeptide_repeat 147 172
IPR002885 Pentatricopeptide_repeat 349 373
IPR002885 Pentatricopeptide_repeat 450 474
IPR002885 Pentatricopeptide_repeat 375 422
IPR002885 Pentatricopeptide_repeat 173 217
IPR002885 Pentatricopeptide_repeat 273 321
No external refs found!