1. Home
  2. Species
  3. Pleocnemia irregularis
  4. Sequence
  5. Pir_g16580

Pir_g16580 (BAM1, BMY7, TR-BAMY)


Aliases : BAM1, BMY7, TR-BAMY

Description : EC_3.2 glycosylase & original description: none


Gene families : OG0000477 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000477_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g16580

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00150440 BMY8, BAM3,... Carbohydrate metabolism.starch... 0.02 OrthoFinder output from all 47 species
AMTR_s00098p00153370 RAM1, BMY1,... Carbohydrate metabolism.starch... 0.03 OrthoFinder output from all 47 species
AT2G32290 BMY5, BAM6 beta-amylase 6 0.03 OrthoFinder output from all 47 species
Adi_g117405 BAM1, BMY7, TR-BAMY EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Als_g05070 BAM1, BMY7, TR-BAMY EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06607 BMY8, BAM3, CT-BMY EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene44603.t1 BMY5, BAM6,... EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g13700 BMY8, BAM3, CT-BMY EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g17119 BAM1, BMY7, TR-BAMY EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os03g04770.1 BAM1, BMY7,... beta amylase 0.02 OrthoFinder output from all 47 species
LOC_Os10g41550.1 BMY8, BAM3,... beta amylase 0.02 OrthoFinder output from all 47 species
MA_3193g0010 BMY8, BAM3, CT-BMY beta amylase 0.02 OrthoFinder output from all 47 species
MA_9400165g0010 BMY8, BAM3, CT-BMY beta amylase 0.02 OrthoFinder output from all 47 species
Msp_g16042 BAM1, BMY7, TR-BAMY EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g19249 BMY8, BAM3, CT-BMY EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g09045 BAM1, BMY7, TR-BAMY EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0087.g018480 BAM1, BMY7, TR-BAMY EC_3.2 glycosylase & original description: CDS=293-2071 0.03 OrthoFinder output from all 47 species
Sam_g07345 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g19841 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g14984 BMY8, BAM3, CT-BMY EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEA Interproscan
MF GO:0016161 beta-amylase activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
InterPro domains Description Start Stop
IPR001554 Glyco_hydro_14 121 546
No external refs found!