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  5. Pir_g17484

Pir_g17484


Description : AP2-type transcription factor *(WRI/AIL) & original description: none


Gene families : OG0000110 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000110_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g17484
Cluster HCCA: Cluster_31

Target Alias Description ECC score Gene Family Method Actions
Aob_g17577 No alias AP2-type transcription factor *(WRI/AIL) & original... 0.02 OrthoFinder output from all 47 species
Aop_g06262 No alias AP2-type transcription factor *(WRI/AIL) & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene04754.t1 Aspi01Gene04754 AP2-type transcription factor *(WRI/AIL) & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene04754.t2 Aspi01Gene04754 AP2-type transcription factor *(WRI/AIL) & original... 0.04 OrthoFinder output from all 47 species
Aspi01Gene38120.t1 PLT2, Aspi01Gene38120 AP2-type transcription factor *(WRI/AIL) & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene67586.t1 AP2, FLO2, FL1,... AP2-type transcription factor *(WRI/AIL) & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01011350001 No alias External stimuli response.biotic... 0.03 OrthoFinder output from all 47 species
Len_g45546 WRI1, ATWRI1, ASML1, WRI AP2-type transcription factor *(WRI/AIL) & original... 0.04 OrthoFinder output from all 47 species
Nbi_g28976 No alias AP2-type transcription factor *(WRI/AIL) & original... 0.03 OrthoFinder output from all 47 species
Ore_g38661 ADAP AP2-type transcription factor *(WRI/AIL) & original... 0.03 OrthoFinder output from all 47 species
Ore_g41099 WRI1, ATWRI1, ASML1, WRI AP2-type transcription factor *(WRI/AIL) & original... 0.03 OrthoFinder output from all 47 species
Pir_g06192 PLT2 AP2-type transcription factor *(WRI/AIL) & original... 0.03 OrthoFinder output from all 47 species
Pnu_g13918 AP2, FLO2, FL1 AP2-type transcription factor *(WRI/AIL) & original... 0.02 OrthoFinder output from all 47 species
Solyc12g010490.3.1 ADAP, Solyc12g010490 transcription factor (AP2) 0.02 OrthoFinder output from all 47 species
Zm00001e019489_P001 WRI1, ATWRI1,... transcription factor (AP2) 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0009733 response to auxin IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 88 147
IPR001471 AP2/ERF_dom 190 241
No external refs found!