Pir_g17600


Description : not classified & original description: none


Gene families : OG0000872 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000872_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g17600
Cluster HCCA: Cluster_252

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00046p00044470 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AT2G19460 No alias Protein of unknown function (DUF3511) 0.04 OrthoFinder output from all 47 species
AT4G09890 No alias Protein of unknown function (DUF3511) 0.02 OrthoFinder output from all 47 species
Aop_g31744 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0038.g026151 No alias not classified & original description: CDS=1-483 0.03 OrthoFinder output from all 47 species
GSVIVT01035043001 No alias No description available 0.03 OrthoFinder output from all 47 species
LOC_Os01g38660.1 LOC_Os01g38660 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Msp_g30639 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g46850 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g30526 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g29798 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g01018 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g06092 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc07g040730.1.1 Solyc07g040730 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc08g062810.1.1 Solyc08g062810 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc09g075650.3.1 Solyc09g075650 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Spa_g18412 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g54435 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000226 microtubule cytoskeleton organization IEP HCCA
BP GO:0001578 microtubule bundle formation IEP HCCA
MF GO:0003746 translation elongation factor activity IEP HCCA
CC GO:0005874 microtubule IEP HCCA
CC GO:0005879 axonemal microtubule IEP HCCA
CC GO:0005881 cytoplasmic microtubule IEP HCCA
BP GO:0006417 regulation of translation IEP HCCA
BP GO:0006448 regulation of translational elongation IEP HCCA
BP GO:0006449 regulation of translational termination IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0009891 positive regulation of biosynthetic process IEP HCCA
BP GO:0009893 positive regulation of metabolic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0010557 positive regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0010604 positive regulation of macromolecule metabolic process IEP HCCA
BP GO:0010608 post-transcriptional regulation of gene expression IEP HCCA
BP GO:0010628 positive regulation of gene expression IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031325 positive regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0031328 positive regulation of cellular biosynthetic process IEP HCCA
BP GO:0034248 regulation of amide metabolic process IEP HCCA
BP GO:0034250 positive regulation of amide metabolic process IEP HCCA
BP GO:0035082 axoneme assembly IEP HCCA
MF GO:0043021 ribonucleoprotein complex binding IEP HCCA
MF GO:0043022 ribosome binding IEP HCCA
BP GO:0043243 positive regulation of protein-containing complex disassembly IEP HCCA
BP GO:0043244 regulation of protein-containing complex disassembly IEP HCCA
MF GO:0044877 protein-containing complex binding IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0045727 positive regulation of translation IEP HCCA
BP GO:0045901 positive regulation of translational elongation IEP HCCA
BP GO:0045905 positive regulation of translational termination IEP HCCA
BP GO:0048518 positive regulation of biological process IEP HCCA
BP GO:0048522 positive regulation of cellular process IEP HCCA
BP GO:0051128 regulation of cellular component organization IEP HCCA
BP GO:0051130 positive regulation of cellular component organization IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051173 positive regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051246 regulation of protein metabolic process IEP HCCA
BP GO:0051247 positive regulation of protein metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
CC GO:0099080 supramolecular complex IEP HCCA
CC GO:0099081 supramolecular polymer IEP HCCA
CC GO:0099512 supramolecular fiber IEP HCCA
CC GO:0099513 polymeric cytoskeletal fiber IEP HCCA
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!