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  5. Pir_g17642

Pir_g17642 (MYB45, AtMYB45)


Aliases : MYB45, AtMYB45

Description : not classified & original description: none


Gene families : OG0000015 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g17642
Cluster HCCA: Cluster_44

Target Alias Description ECC score Gene Family Method Actions
AT3G06490 BOS1, AtMYB108, MYB108 myb domain protein 108 0.03 OrthoFinder output from all 47 species
Aop_g13885 MYB86, ATMYB86 MYB class-R2R3 subgroup-13 transcription factor &... 0.03 OrthoFinder output from all 47 species
Ceric.21G043600.1 MYB86, ATMYB86,... not classified & original description: pacid=50602804... 0.03 OrthoFinder output from all 47 species
Dcu_g16102 ATMYB61, MYB61 MYB class-R2R3 subgroup-13 transcription factor &... 0.03 OrthoFinder output from all 47 species
Dcu_g20359 ATMYB61, MYB61 MYB class-R2R3 subgroup-13 transcription factor &... 0.03 OrthoFinder output from all 47 species
GSVIVT01004464001 MYB84, RAX3, ATMYB84 RNA biosynthesis.transcriptional activation.MYB... 0.04 OrthoFinder output from all 47 species
GSVIVT01027182001 PFG3, ATMYB111, MYB111 RNA biosynthesis.transcriptional activation.MYB... 0.02 OrthoFinder output from all 47 species
Gb_11232 MYB3, ATMYB3 transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Gb_22239 AtMYB50, MYB50 transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
LOC_Os01g59660.1 MYB33, ATMYB33,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
LOC_Os11g03440.1 MYB60, AtMYB60,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
Lfl_g17349 ATMYB4, MYB4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10426901g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_10426901g0020 ATMYB12, PFG1, MYB12 transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
MA_17672g0010 MYB68, ATMYB68 transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
MA_2026g0010 ATMYB4, MYB4 transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
Msp_g24762 AtMYB50, MYB50 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g44338 MYB3, ATMYB3 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g15609 ATMYB46, MYB46 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g005660.3.1 ATMYB5, MYB5,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
Zm00001e024037_P001 MYB60, AtMYB60,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Zm00001e026464_P001 Zm00001e026464 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e039235_P001 MYB60, AtMYB60,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005199 structural constituent of cell wall IEP HCCA
BP GO:0009664 plant-type cell wall organization IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0071669 plant-type cell wall organization or biogenesis IEP HCCA
InterPro domains Description Start Stop
IPR001005 SANT/Myb 8 53
IPR001005 SANT/Myb 61 104
No external refs found!