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  5. Pir_g17989

Pir_g17989 (RPS18A, PFL, PFL1)


Aliases : RPS18A, PFL, PFL1

Description : component *(uS13) of small ribosomal-subunit (SSU) proteome & original description: none


Gene families : OG0001648 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001648_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g17989

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00078p00178430 RPS18A, PFL,... Protein biosynthesis.cytosolic ribosome.small subunit... 0.06 OrthoFinder output from all 47 species
AT1G22780 RPS18A, PFL, PFL1 Ribosomal protein S13/S18 family 0.05 OrthoFinder output from all 47 species
AT1G34030 No alias Ribosomal protein S13/S18 family 0.03 OrthoFinder output from all 47 species
AT4G09800 RPS18C S18 ribosomal protein 0.04 OrthoFinder output from all 47 species
Adi_g110360 RPS18A, PFL, PFL1 component *(uS13) of small ribosomal-subunit (SSU)... 0.04 OrthoFinder output from all 47 species
Als_g13802 RPS18A, PFL, PFL1 component *(uS13) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
Aop_g07943 RPS18A, PFL, PFL1 component *(uS13) of small ribosomal-subunit (SSU)... 0.05 OrthoFinder output from all 47 species
Azfi_s0157.g053803 RPS18A, PFL, PFL1 component *(uS13) of small ribosomal-subunit (SSU)... 0.05 OrthoFinder output from all 47 species
Azfi_s0393.g067809 RPS18A, PFL, PFL1 component *(uS13) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Ceric.06G075100.1 RPS18A, PFL,... component *(uS13) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Ceric.25G059000.1 RPS18A, PFL,... component *(uS13) of small ribosomal-subunit (SSU)... 0.07 OrthoFinder output from all 47 species
Cre06.g272950 RPS18A, PFL, PFL1 Protein biosynthesis.cytosolic ribosome.small subunit... 0.07 OrthoFinder output from all 47 species
Dac_g30011 RPS18A, PFL, PFL1 component *(uS13) of small ribosomal-subunit (SSU)... 0.06 OrthoFinder output from all 47 species
Dcu_g07903 RPS18A, PFL, PFL1 component *(uS13) of small ribosomal-subunit (SSU)... 0.05 OrthoFinder output from all 47 species
GSVIVT01034582001 RPS18A, PFL, PFL1 Protein biosynthesis.cytosolic ribosome.small subunit... 0.03 OrthoFinder output from all 47 species
LOC_Os03g58050.1 RPS18A, PFL,... component RPS18 of SSU proteome 0.1 OrthoFinder output from all 47 species
LOC_Os07g07709.1 RPS18A, PFL,... component RPS18 of SSU proteome 0.03 OrthoFinder output from all 47 species
Lfl_g31910 RPS18A, PFL, PFL1 component *(uS13) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
MA_10429265g0010 RPS18A, PFL, PFL1 component RPS18 of SSU proteome 0.06 OrthoFinder output from all 47 species
MA_10431843g0010 RPS18A, PFL, PFL1 component RPS18 of SSU proteome 0.05 OrthoFinder output from all 47 species
Mp1g07420.1 RPS18A, PFL, PFL1 component RPS18 of SSU proteome 0.05 OrthoFinder output from all 47 species
Mp5g02820.1 RPS18A, PFL, PFL1 component RPS18 of SSU proteome 0.06 OrthoFinder output from all 47 species
Msp_g30950 RPS18A, PFL, PFL1 component *(uS13) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Pp3c16_2090V3.1 RPS18A, PFL,... Ribosomal protein S13/S18 family 0.03 OrthoFinder output from all 47 species
Pp3c6_21770V3.1 RPS18A, PFL,... Ribosomal protein S13/S18 family 0.08 OrthoFinder output from all 47 species
Sam_g11517 No alias component *(uS13) of small ribosomal-subunit (SSU)... 0.04 OrthoFinder output from all 47 species
Sam_g35155 No alias component *(uS13) of small ribosomal-subunit (SSU)... 0.05 OrthoFinder output from all 47 species
Smo267619 RPS18A, PFL, PFL1 Protein biosynthesis.cytosolic ribosome.small subunit... 0.04 OrthoFinder output from all 47 species
Solyc03g078290.3.1 RPS18A, PFL,... component RPS18 of SSU proteome 0.05 OrthoFinder output from all 47 species
Solyc06g073370.4.1 RPS18A, PFL,... component RPS18 of SSU proteome 0.06 OrthoFinder output from all 47 species
Solyc11g005680.2.1 RPS18A, PFL,... component RPS18 of SSU proteome 0.03 OrthoFinder output from all 47 species
Spa_g10602 RPS18A, PFL, PFL1 component *(uS13) of small ribosomal-subunit (SSU)... 0.05 OrthoFinder output from all 47 species
Spa_g10603 RPS18A, PFL, PFL1 component *(uS13) of small ribosomal-subunit (SSU)... 0.05 OrthoFinder output from all 47 species
Spa_g40316 RPS18A, PFL, PFL1 component *(uS13) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Tin_g22509 RPS18A, PFL, PFL1 component *(uS13) of small ribosomal-subunit (SSU)... 0.04 OrthoFinder output from all 47 species
Zm00001e005967_P001 RPS18A, PFL,... component RPS18 of SSU proteome 0.06 OrthoFinder output from all 47 species
Zm00001e011880_P001 RPS18A, PFL,... component RPS18 of SSU proteome 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005743 mitochondrial inner membrane IEP HCCA
CC GO:0016020 membrane IEP HCCA
CC GO:0019866 organelle inner membrane IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
CC GO:0031966 mitochondrial membrane IEP HCCA
CC GO:0061617 MICOS complex IEP HCCA
CC GO:0098798 mitochondrial protein-containing complex IEP HCCA
CC GO:0098800 inner mitochondrial membrane protein complex IEP HCCA
InterPro domains Description Start Stop
IPR001892 Ribosomal_S13 55 183
No external refs found!