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  5. Pir_g18021

Pir_g18021


Description : not classified & original description: none


Gene families : OG0002290 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002290_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g18021
Cluster HCCA: Cluster_5

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00008p00109510 evm_27.TU.AmTr_v1... Translation factor GUF1 homolog, chloroplastic OS=Vitis vinifera 0.06 OrthoFinder output from all 47 species
AT5G08650 No alias Small GTP-binding protein 0.09 OrthoFinder output from all 47 species
Adi_g116309 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g09651 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g04580 No alias not classified & original description: none 0.12 OrthoFinder output from all 47 species
Aspi01Gene43914.t1 Aspi01Gene43914 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0072.g036902 No alias not classified & original description: CDS=1-1971 0.03 OrthoFinder output from all 47 species
Ceric.02G059400.1 Ceric.02G059400 not classified & original description: pacid=50584081... 0.07 OrthoFinder output from all 47 species
Cre03.g165000 No alias Translation factor GUF1 homolog, chloroplastic... 0.06 OrthoFinder output from all 47 species
Dac_g07140 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dde_g11300 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
GSVIVT01022409001 No alias Translation factor GUF1 homolog, chloroplastic OS=Vitis vinifera 0.07 OrthoFinder output from all 47 species
LOC_Os02g06300.1 LOC_Os02g06300 Translation factor GUF1 homolog, chloroplastic OS=Oryza... 0.11 OrthoFinder output from all 47 species
Len_g04338 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g03115 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g11300 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Nbi_g19015 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Ore_g09463 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g10075 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g43097 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g39971 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo407721 No alias Translation factor GUF1 homolog, chloroplastic OS=Oryza... 0.03 OrthoFinder output from all 47 species
Solyc04g015450.3.1 Solyc04g015450 Translation factor GUF1 homolog, chloroplastic... 0.09 OrthoFinder output from all 47 species
Spa_g04229 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Tin_g01086 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Zm00001e025200_P002 Zm00001e025200 Translation factor GUF1 homolog, chloroplastic OS=Oryza... 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0003951 NAD+ kinase activity IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006739 NADP metabolic process IEP HCCA
BP GO:0006741 NADP biosynthetic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
BP GO:0019359 nicotinamide nucleotide biosynthetic process IEP HCCA
BP GO:0019362 pyridine nucleotide metabolic process IEP HCCA
BP GO:0019363 pyridine nucleotide biosynthetic process IEP HCCA
BP GO:0046496 nicotinamide nucleotide metabolic process IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
BP GO:0072524 pyridine-containing compound metabolic process IEP HCCA
BP GO:0072525 pyridine-containing compound biosynthetic process IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR000640 EFG_V-like 506 592
IPR004161 EFTu-like_2 312 382
IPR000795 T_Tr_GTP-bd_dom 110 288
IPR013842 LepA_CTD 595 701
No external refs found!