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  5. Pir_g18145

Pir_g18145


Description : not classified & original description: none


Gene families : OG0001173 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001173_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g18145
Cluster HCCA: Cluster_223

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00154210 At-RSZ22a,... RNA processing.RNA splicing.spliceosome-associated... 0.02 OrthoFinder output from all 47 species
AT4G31580 RSZ22, At-RSZ22,... serine/arginine-rich 22 0.02 OrthoFinder output from all 47 species
Adi_g020430 At-RSZ22a, RSZ22a RNA splicing factor *(RSZ21/22) & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g03230 At-RSZ22a, RSZ22a RNA splicing factor *(RSZ21/22) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene41351.t1 At-RSZ22a,... RNA splicing factor *(RSZ21/22) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.39G002300.1 At-RSZ22a,... RNA splicing factor *(RSZ21/22) & original description:... 0.03 OrthoFinder output from all 47 species
Cre09.g408200 At-RSZ22a, RSZ22a RNA processing.RNA splicing.spliceosome-associated... 0.01 OrthoFinder output from all 47 species
Gb_20020 RSZ21, At-RSZ21,... RSZ21/22 RNA splicing factor 0.01 OrthoFinder output from all 47 species
MA_10428257g0020 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Sam_g13208 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo68846 At-RSZ22a, RSZ22a RNA processing.RNA splicing.spliceosome-associated... 0.03 OrthoFinder output from all 47 species
Spa_g01672 At-RSZ22a, RSZ22a RNA splicing factor *(RSZ21/22) & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g51937 At-RSZ22a, RSZ22a not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g22621 At-RSZ22a, RSZ22a RNA splicing factor *(RSZ21/22) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e016090_P001 At-RSZ22a,... RSZ21/22 RNA splicing factor 0.01 OrthoFinder output from all 47 species
Zm00001e022939_P001 At-RSZ22a,... RSZ21/22 RNA splicing factor 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0001671 ATPase activator activity IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0051087 chaperone binding IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
InterPro domains Description Start Stop
IPR001878 Znf_CCHC 29 45
IPR001878 Znf_CCHC 65 80
No external refs found!