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  5. Pir_g18219

Pir_g18219


Description : bHLH-type transcription factor & original description: none


Gene families : OG0000019 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g18219
Cluster HCCA: Cluster_12

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00013p00245920 evm_27.TU.AmTr_v1... External stimuli response.light.UV-A/blue... 0.03 OrthoFinder output from all 47 species
AMTR_s00016p00138470 evm_27.TU.AmTr_v1... External stimuli response.light.UV-A/blue... 0.04 OrthoFinder output from all 47 species
AMTR_s00024p00250370 RHD6,... RNA biosynthesis.transcriptional activation.bHLH... 0.03 OrthoFinder output from all 47 species
AMTR_s00133p00027110 BPEp, ZCW32,... External stimuli response.light.UV-A/blue... 0.05 OrthoFinder output from all 47 species
AT1G09530 PIF3, POC1, PAP3 phytochrome interacting factor 3 0.02 OrthoFinder output from all 47 species
AT2G46970 PIL1 phytochrome interacting factor 3-like 1 0.02 OrthoFinder output from all 47 species
AT3G50330 HEC2 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
AT4G28800 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 OrthoFinder output from all 47 species
AT5G50915 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.06 OrthoFinder output from all 47 species
AT5G67060 HEC1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g103433 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g17433 CIB1 regulatory protein (CIB) of blue light perception &... 0.04 OrthoFinder output from all 47 species
Ala_g10817 SPT bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g12396 HEC1 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g18457 LRL3 bHLH-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Als_g49316 SPT bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Als_g49595 LRL3 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g19085 No alias bHLH-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene35112.t2 SPT, Aspi01Gene35112 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene46202.t2 Aspi01Gene46202 regulatory protein (CIB) of blue light perception &... 0.02 OrthoFinder output from all 47 species
Aspi01Gene54622.t1 LRL3, Aspi01Gene54622 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene54623.t1 LRL3, Aspi01Gene54623 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g55636 LRL3 bHLH-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.21G084700.1 PIF3, POC1,... bHLH-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Dcu_g51679 HEC2 bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01008299001 BEE3 External stimuli response.light.UV-A/blue... 0.03 OrthoFinder output from all 47 species
GSVIVT01009467001 SPT RNA biosynthesis.transcriptional activation.bHLH... 0.03 OrthoFinder output from all 47 species
GSVIVT01013553001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.02 OrthoFinder output from all 47 species
Gb_33185 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.04 OrthoFinder output from all 47 species
LOC_Os01g38610.1 LOC_Os01g38610 transcription factor (bHLH) 0.04 OrthoFinder output from all 47 species
LOC_Os01g68700.1 LOC_Os01g68700 transcription factor (bHLH). transcriptional regulator (CIB) 0.04 OrthoFinder output from all 47 species
Len_g13542 No alias regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
MA_10344244g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_158362g0010 CIB5 transcription factor (bHLH). transcriptional regulator (CIB) 0.02 OrthoFinder output from all 47 species
Mp3g17930.1 ATRSL1, RSL1 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Ore_g14316 PIF3, POC1, PAP3 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g05994 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g21397 RSL4 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c3_8460V3.1 RSL2, Pp3c3_8460 ROOT HAIR DEFECTIVE 6-LIKE 2 0.01 OrthoFinder output from all 47 species
Ppi_g28847 No alias regulatory protein (CIB) of blue light perception &... 0.02 OrthoFinder output from all 47 species
Ppi_g62088 CIB1 regulatory protein (CIB) of blue light perception &... 0.02 OrthoFinder output from all 47 species
Solyc01g109700.3.1 CIB1, Solyc01g109700 transcription factor (bHLH). transcriptional regulator (CIB) 0.05 OrthoFinder output from all 47 species
Solyc02g093280.2.1 SPT, Solyc02g093280 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Solyc05g006650.3.1 Solyc05g006650 transcription factor (bHLH). transcriptional regulator (CIB) 0.03 OrthoFinder output from all 47 species
Solyc10g018510.2.1 UNE10, Solyc10g018510 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Solyc12g088790.3.1 HEC2, Solyc12g088790 transcription factor (bHLH) 0.04 OrthoFinder output from all 47 species
Spa_g05229 HEC1 bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g22941 SPT bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g57305 No alias bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g27626 SPT bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g45190 LRL3 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e011084_P002 Zm00001e011084 transcription factor (bHLH). transcriptional regulator (CIB) 0.02 OrthoFinder output from all 47 species
Zm00001e020477_P001 Zm00001e020477 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Zm00001e027758_P002 Zm00001e027758 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004359 glutaminase activity IEP HCCA
BP GO:0006081 cellular aldehyde metabolic process IEP HCCA
BP GO:0006766 vitamin metabolic process IEP HCCA
BP GO:0006767 water-soluble vitamin metabolic process IEP HCCA
BP GO:0009110 vitamin biosynthetic process IEP HCCA
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP HCCA
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP HCCA
BP GO:0019637 organophosphate metabolic process IEP HCCA
BP GO:0042364 water-soluble vitamin biosynthetic process IEP HCCA
BP GO:0042816 vitamin B6 metabolic process IEP HCCA
BP GO:0042819 vitamin B6 biosynthetic process IEP HCCA
BP GO:0042822 pyridoxal phosphate metabolic process IEP HCCA
BP GO:0042823 pyridoxal phosphate biosynthetic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046184 aldehyde biosynthetic process IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0072524 pyridine-containing compound metabolic process IEP HCCA
BP GO:0072525 pyridine-containing compound biosynthetic process IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
BP GO:1901615 organic hydroxy compound metabolic process IEP HCCA
BP GO:1901617 organic hydroxy compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR011598 bHLH_dom 388 434
No external refs found!