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  5. Pir_g18343

Pir_g18343


Description : not classified & original description: none


Gene families : OG0004539 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004539_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g18343
Cluster HCCA: Cluster_5

Target Alias Description ECC score Gene Family Method Actions
Adi_g025683 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Adi_g085364 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g02005 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Ala_g07699 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g48067 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Aop_g06000 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g23312 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Cre06.g278096 No alias No description available 0.02 OrthoFinder output from all 47 species
Cre16.g691351 No alias No description available 0.01 OrthoFinder output from all 47 species
LOC_Os03g51950.1 LOC_Os03g51950 no description available(sp|q9zuu2|pxl2c_arath : 87.0) 0.03 OrthoFinder output from all 47 species
Pnu_g24570 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g13871 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g05951 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g00580 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e012107_P001 Zm00001e012107 no description available(sp|q9zuu2|pxl2c_arath : 88.6) 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
MF GO:0008113 peptide-methionine (S)-S-oxide reductase activity IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP HCCA
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR032801 PXL2A/B/C 123 240
No external refs found!