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  5. Pir_g18526

Pir_g18526 (TMO6)


Aliases : TMO6

Description : transcription factor *(DOF) & original description: none


Gene families : OG0000067 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000067_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g18526
Cluster HCCA: Cluster_233

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00012p00176640 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.02 OrthoFinder output from all 47 species
AMTR_s00058p00210070 TMO6,... RNA biosynthesis.transcriptional activation.C2C2... 0.02 OrthoFinder output from all 47 species
AT2G34140 No alias Dof-type zinc finger DNA-binding family protein 0.03 OrthoFinder output from all 47 species
AT5G60200 TMO6 TARGET OF MONOPTEROS 6 0.03 OrthoFinder output from all 47 species
Adi_g002851 OBP4 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g016055 TMO6 transcription factor *(DOF) & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g081944 OBP4 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g20056 CDF3 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g11020 CDF2 transcription factor *(DOF) & original description: none 0.05 OrthoFinder output from all 47 species
Als_g18462 No alias transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g27376 No alias transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g39186 No alias transcription factor *(DOF) & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g25388 TMO6 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g67430 TMO6 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene34893.t1 OBP4, Aspi01Gene34893 transcription factor *(DOF) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene44031.t1 Aspi01Gene44031 transcription factor *(DOF) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene47016.t1 CDF2, Aspi01Gene47016 transcription factor *(DOF) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene53704.t2 ADOF1, DOF1,... transcription factor *(DOF) & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s0004.g008799 ADOF1, DOF1 transcription factor *(DOF) & original description: CDS=1-1614 0.03 OrthoFinder output from all 47 species
Azfi_s0008.g011464 No alias not classified & original description: CDS=1-2679 0.05 OrthoFinder output from all 47 species
Azfi_s0166.g054389 TMO6 transcription factor *(DOF) & original description: CDS=1-1341 0.02 OrthoFinder output from all 47 species
Azfi_s0197.g057380 ADOF1, DOF1 transcription factor *(DOF) & original description: CDS=242-1003 0.04 OrthoFinder output from all 47 species
Cba_g26303 TMO6 transcription factor *(DOF) & original description: none 0.07 OrthoFinder output from all 47 species
Cba_g39110 No alias transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g71501 ADOF1, DOF1 transcription factor *(DOF) & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.12G067800.1 Ceric.12G067800 transcription factor *(DOF) & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.22G023400.1 OBP3, Ceric.22G023400 transcription factor *(DOF) & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.22G032900.1 TMO6, Ceric.22G032900 transcription factor *(DOF) & original description:... 0.03 OrthoFinder output from all 47 species
Dcu_g31456 No alias transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g45064 CDF3 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g12009 DOF2.4, ATDOF2.4 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g18747 No alias transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g27128 CDF3 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Gb_20144 HCA2, DOF5.6 transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
Gb_20867 CDF3 Cyclic dof factor 3 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os01g15900.1 CDF2, LOC_Os01g15900 transcription factor (DOF) 0.02 OrthoFinder output from all 47 species
LOC_Os02g49440.1 ADOF1, DOF1,... transcription factor (DOF) 0.02 OrthoFinder output from all 47 species
LOC_Os03g07360.1 CDF3, LOC_Os03g07360 transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
LOC_Os05g02150.1 OBP3, LOC_Os05g02150 transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
Len_g10091 TMO6 transcription factor *(DOF) & original description: none 0.06 OrthoFinder output from all 47 species
Len_g10120 TMO6 transcription factor *(DOF) & original description: none 0.04 OrthoFinder output from all 47 species
Len_g39179 CDF1 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g05583 CDF3 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g16402 No alias transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g23147 CDF3 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Mp2g20790.1 TMO6 transcription factor (DOF) 0.02 OrthoFinder output from all 47 species
Msp_g32354 TMO6 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g45088 TMO6 transcription factor *(DOF) & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g03668 No alias transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g25217 OBP4 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g33176 No alias transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g42292 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g05506 No alias transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g60948 CDF3 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g03112 TMO6 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g10910 CDF1 transcription factor *(DOF) & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g11813 TMO6 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g26540 CDF2 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g07474 TMO6 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g32547 CDF3 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0024.g008984 No alias transcription factor *(DOF) & original description: CDS=332-1984 0.02 OrthoFinder output from all 47 species
Solyc02g078620.1.1 ADOF2, DOF2,... transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
Solyc05g007880.4.1 CDF1, Solyc05g007880 Cyclic dof factor 2 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc06g062520.1.1 ADOF1, DOF1,... transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
Solyc09g010680.3.1 Solyc09g010680 transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
Solyc10g086440.2.1 DOF2.4,... transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
Solyc11g072500.2.1 TMO6, Solyc11g072500 transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
Spa_g49511 TMO6 transcription factor *(DOF) & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g14068 OBP3 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g23610 TMO6 transcription factor *(DOF) & original description: none 0.07 OrthoFinder output from all 47 species
Tin_g28492 CDF2 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e007228_P002 Zm00001e007228 transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
Zm00001e011750_P002 Zm00001e011750 transcription factor (DOF) 0.02 OrthoFinder output from all 47 species
Zm00001e012824_P001 CDF1, Zm00001e012824 transcription factor (DOF) 0.04 OrthoFinder output from all 47 species
Zm00001e015414_P004 Zm00001e015414 transcription factor (DOF) 0.02 OrthoFinder output from all 47 species
Zm00001e015597_P001 HCA2, DOF5.6,... transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
Zm00001e023218_P004 Zm00001e023218 transcription factor (DOF) 0.02 OrthoFinder output from all 47 species
Zm00001e027634_P002 OBP3, Zm00001e027634 transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
Zm00001e029641_P001 OBP3, Zm00001e029641 transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
Zm00001e034454_P001 ADOF1, DOF1,... transcription factor (DOF) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0006457 protein folding IEP HCCA
InterPro domains Description Start Stop
IPR003851 Znf_Dof 76 132
No external refs found!