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  5. Pir_g18539

Pir_g18539 (TET8)


Aliases : TET8

Description : regulatory protein *(TET8/9) of extracellular vesicle trafficking & original description: none


Gene families : OG0000199 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000199_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g18539
Cluster HCCA: Cluster_233

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00108p00058320 evm_27.TU.AmTr_v1... Tetraspanin-6 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AT2G23810 TET8 tetraspanin8 0.02 OrthoFinder output from all 47 species
AT4G23410 TET5 tetraspanin5 0.03 OrthoFinder output from all 47 species
Adi_g009018 TET7 regulatory protein *(TET8/9) of extracellular vesicle... 0.03 OrthoFinder output from all 47 species
Ala_g01222 TET8 regulatory protein *(TET8/9) of extracellular vesicle... 0.06 OrthoFinder output from all 47 species
Ala_g37511 TET8 regulatory protein *(TET8/9) of extracellular vesicle... 0.03 OrthoFinder output from all 47 species
Als_g02930 No alias regulatory protein *(TET8/9) of extracellular vesicle... 0.02 OrthoFinder output from all 47 species
Aspi01Gene58457.t1 TET8, Aspi01Gene58457 regulatory protein *(TET8/9) of extracellular vesicle... 0.03 OrthoFinder output from all 47 species
Ceric.04G086100.1 TET8, Ceric.04G086100 not classified & original description: pacid=50631329... 0.02 OrthoFinder output from all 47 species
LOC_Os02g12750.1 TET2, LOC_Os02g12750 Tetraspanin-2 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os08g16050.1 TET8, LOC_Os08g16050 Tetraspanin-7 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Len_g03212 TET8 regulatory protein *(TET8/9) of extracellular vesicle... 0.03 OrthoFinder output from all 47 species
Len_g11328 TET8 regulatory protein *(TET8/9) of extracellular vesicle... 0.03 OrthoFinder output from all 47 species
MA_391725g0010 TET2 Tetraspanin-2 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Ppi_g24700 TET8 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc03g059390.3.1 TET2, Solyc03g059390 Tetraspanin-2 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Solyc04g049080.4.1 TET6, Solyc04g049080 Tetraspanin-5 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc07g006280.3.1 TET8, Solyc07g006280 Tetraspanin-8 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Spa_g13175 TET8 regulatory protein *(TET8/9) of extracellular vesicle... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP HCCA
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP HCCA
BP GO:0000398 mRNA splicing, via spliceosome IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR018499 Tetraspanin/Peripherin 5 256
No external refs found!