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  5. Pir_g18632

Pir_g18632


Description : not classified & original description: none


Gene families : OG0000003 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g18632

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00111p00051610 TINY2,... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 OrthoFinder output from all 47 species
AT1G49120 No alias Integrase-type DNA-binding superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g044380 DREB2A, DREB2 subgroup ERF-IV/DREB2 transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aob_g08822 ATERF-9, ERF9, ATERF9 subgroup ERF-VIII transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aob_g29351 RAP2.11 transcription factor *(ERN1) & original description: none 0.01 OrthoFinder output from all 47 species
Aob_g30583 LEP not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g15011 DEAR3 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Azfi_s0234.g059449 No alias subgroup ERF-III transcription factor & original... 0.01 OrthoFinder output from all 47 species
Cba_g23893 RAP2.2 transcription factor component *(HRE/RAP2.12) of... 0.02 OrthoFinder output from all 47 species
Dac_g09321 HRE2 transcription factor component *(HRE/RAP2.12) of... 0.02 OrthoFinder output from all 47 species
Dcu_g02595 HRE2 transcription factor component *(HRE/RAP2.12) of... 0.03 OrthoFinder output from all 47 species
LOC_Os04g55520.1 DEAR3, LOC_Os04g55520 transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
LOC_Os05g49700.1 LOC_Os05g49700 transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
Pir_g18798 TINY2 subgroup ERF-III transcription factor & original... 0.02 OrthoFinder output from all 47 species
Pir_g26105 RAP2.12 transcription factor component *(HRE/RAP2.12) of... 0.03 OrthoFinder output from all 47 species
Pir_g28144 DDF1 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sam_g09689 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g16459 No alias subgroup ERF-VI transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Solyc02g090800.1.1 RAP2.6, Solyc02g090800 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Solyc03g123500.4.1 RAP2.12, Solyc03g123500 transcription factor (ERF) 0.01 OrthoFinder output from all 47 species
Spa_g26845 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Tin_g13149 ATERF-9, ERF9, ATERF9 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e033790_P001 Zm00001e033790 transcription factor (ERF) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004143 diacylglycerol kinase activity IEP HCCA
BP GO:0006778 porphyrin-containing compound metabolic process IEP HCCA
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP HCCA
BP GO:0006783 heme biosynthetic process IEP HCCA
BP GO:0006784 heme A biosynthetic process IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0007186 G protein-coupled receptor signaling pathway IEP HCCA
BP GO:0007205 protein kinase C-activating G protein-coupled receptor signaling pathway IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015031 protein transport IEP HCCA
MF GO:0015299 obsolete solute:proton antiporter activity IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP HCCA
MF GO:0016653 oxidoreductase activity, acting on NAD(P)H, heme protein as acceptor IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
MF GO:0031267 small GTPase binding IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033014 tetrapyrrole biosynthetic process IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0042168 heme metabolic process IEP HCCA
BP GO:0042440 pigment metabolic process IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046148 pigment biosynthetic process IEP HCCA
BP GO:0046160 heme a metabolic process IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
MF GO:0051020 GTPase binding IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 569 614
IPR025927 Potential_DNA-bd 301 363
IPR003340 B3_DNA-bd 47 130
No external refs found!