Aliases : ATH1, ATATH1, ABCA2
Description : not classified & original description: none
Gene families : OG0001787 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001787_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Pir_g19384 | |
| Cluster | HCCA: Cluster_31 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Pnu_g06474 | ATH1, ATATH1, ABCA2 | subfamily ABCA transporter & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g06475 | ATH15, ATATH15 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Solyc03g113070.4.1 | ATH1, ATATH1,... | fatty acid transporter (ABCA). subfamily ABCA transporter | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005524 | ATP binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0016830 | carbon-carbon lyase activity | IEP | HCCA |
| MF | GO:0016832 | aldehyde-lyase activity | IEP | HCCA |
| MF | GO:0051287 | NAD binding | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR003439 | ABC_transporter-like_ATP-bd | 19 | 64 |
| No external refs found! |
