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  5. Pir_g19567

Pir_g19567


Description : ssDNA-binding protein *(OSB) & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g19567
Cluster HCCA: Cluster_284

Target Alias Description ECC score Gene Family Method Actions
Aev_g11596 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g18072 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g34516 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g11195 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g12171 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g33537 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g04924 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g08049 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene14400.t1 CRR2, Aspi01Gene14400 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene16549.t1 EMB2261, Aspi01Gene16549 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g06556 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g33015 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001130.28 No alias No description available 0.01 OrthoFinder output from all 47 species
Dac_g05254 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g33294 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g35962 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g42852 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g08294 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g08889 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g40777 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g03959 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g19160 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_17916 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
LOC_Os03g04390.1 LOC_Os03g04390 Pentatricopeptide repeat-containing protein At4g35130,... 0.03 OrthoFinder output from all 47 species
Len_g03238 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g03293 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g24370 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g12878 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g22808 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g23526 REME1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g32012 OSB1 ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g33905 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ore_g43368 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Pnu_g03873 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g04637 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g04674 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g06451 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g06872 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g29583 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g52857 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g57955 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g59344 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0016.g006756 CRR22 not classified & original description: CDS=1-1713 0.03 OrthoFinder output from all 47 species
Tin_g26720 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g44229 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e000301_P001 Zm00001e000301 Pentatricopeptide repeat-containing protein At4g35130,... 0.02 OrthoFinder output from all 47 species
Zm00001e015727_P001 Zm00001e015727 Pentatricopeptide repeat-containing protein At5g66520... 0.03 OrthoFinder output from all 47 species
Zm00001e016923_P001 CRR2, Zm00001e016923 Pentatricopeptide repeat-containing protein At3g46790,... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 69 95
IPR002885 Pentatricopeptide_repeat 131 160
No external refs found!