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  5. Pir_g19769

Pir_g19769


Description : transcription factor *(CLAUSA) & original description: none


Gene families : OG0000036 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g19769
Cluster HCCA: Cluster_279

Target Alias Description ECC score Gene Family Method Actions
Als_g07758 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Als_g47265 KAN, KAN1 KANADI-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g40723 No alias transcription factor *(CLAUSA) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g19720 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g21846 No alias transcription factor *(CLAUSA) & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g13802 PHL1 GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Dcu_g39820 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ehy_g06613 No alias transcription factor *(CLAUSA) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01013085001 KAN2 RNA biosynthesis.transcriptional activation.MYB... 0.02 OrthoFinder output from all 47 species
LOC_Os05g40960.1 LOC_Os05g40960 G2-like GARP transcription factor 0.03 OrthoFinder output from all 47 species
LOC_Os08g06370.1 KAN2, LOC_Os08g06370 G2-like GARP transcription factor 0.02 OrthoFinder output from all 47 species
Lfl_g06998 No alias GARP subgroup PHL transcription factor & original... 0.04 OrthoFinder output from all 47 species
Lfl_g36756 No alias transcription factor *(CLAUSA) & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g25465 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Nbi_g09077 No alias transcription factor *(CLAUSA) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g06853 No alias transcription factor *(CLAUSA) & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0013.g005961 KAN3 not classified & original description: CDS=52-843 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0019.g007773 PHL1 not classified & original description: CDS=638-1480 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0055.g014434 No alias not classified & original description: CDS=36-716 0.04 OrthoFinder output from all 47 species
Spa_g04247 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Spa_g22319 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Zm00001e022412_P003 KAN2, Zm00001e022412 G2-like GARP transcription factor 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006720 isoprenoid metabolic process IEP HCCA
BP GO:0008299 isoprenoid biosynthetic process IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
BP GO:0009767 photosynthetic electron transport chain IEP HCCA
BP GO:0022900 electron transport chain IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
InterPro domains Description Start Stop
IPR001005 SANT/Myb 44 94
No external refs found!