1. Home
  2. Species
  3. Pleocnemia irregularis
  4. Sequence
  5. Pir_g20057

Pir_g20057


Description : not classified & original description: none


Gene families : OG0000995 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000995_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g20057

Target Alias Description ECC score Gene Family Method Actions
Als_g04902 EDA32 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g13308 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g06398 EDA32 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g27786 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g09247 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01026616001 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01031320001 No alias No description available 0.02 OrthoFinder output from all 47 species
Gb_11975 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os07g44320.1 LOC_Os07g44320 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os11g06680.2 LOC_Os11g06680 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Ppi_g32356 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc11g005440.2.1 Solyc11g005440 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Spa_g12543 EDA32 not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004540 ribonuclease activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
InterPro domains Description Start Stop
IPR025605 OST-HTH/LOTUS_dom 775 836
IPR025605 OST-HTH/LOTUS_dom 682 736
IPR021139 NYN_MARF1 10 147
No external refs found!