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  5. Pir_g20390

Pir_g20390 (IDD2, AtIDD2)


Aliases : IDD2, AtIDD2

Description : C2H2 subclass IDD transcription factor & original description: none


Gene families : OG0000265 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000265_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g20390

Target Alias Description ECC score Gene Family Method Actions
Aop_g25392 IDD2, AtIDD2 C2H2 subclass IDD transcription factor & original... 0.04 OrthoFinder output from all 47 species
Ceric.19G078900.1 MGP, Ceric.19G078900 C2H2 subclass IDD transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ehy_g24855 No alias component *(MED19) of head module of MEDIATOR... 0.03 OrthoFinder output from all 47 species
Gb_01996 MGP C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
Gb_17209 IDD16, AtIDD16 C2H2 zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
LOC_Os09g27650.2 IDD14, AtIDD14,... C2H2 zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
Nbi_g03108 MGP C2H2 subclass IDD transcription factor & original... 0.04 OrthoFinder output from all 47 species
Pir_g65810 IDD2, AtIDD2 C2H2 subclass IDD transcription factor & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0066.g016076 MGP C2H2 subclass IDD transcription factor & original... 0.02 OrthoFinder output from all 47 species
Smo9104 IDD2, AtIDD2 RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004177 aminopeptidase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
MF GO:0008173 RNA methyltransferase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0008649 rRNA methyltransferase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
MF GO:0140102 catalytic activity, acting on a rRNA IEP HCCA
InterPro domains Description Start Stop
IPR013087 Znf_C2H2_type 48 70
No external refs found!