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  5. Pir_g21991

Pir_g21991


Description : not classified & original description: none


Gene families : OG0000221 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000221_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g21991
Cluster HCCA: Cluster_70

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00251380 evm_27.TU.AmTr_v1... Protein BPS1, chloroplastic OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00029p00110690 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AMTR_s00040p00052950 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AT1G18740 No alias Protein of unknown function (DUF793) 0.04 OrthoFinder output from all 47 species
AT1G74450 No alias Protein of unknown function (DUF793) 0.02 OrthoFinder output from all 47 species
Adi_g002011 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g009056 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g009779 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g051939 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g084369 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g24209 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene17514.t1 Aspi01Gene17514 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene28412.t1 BPS1, Aspi01Gene28412 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene58350.t1 Aspi01Gene58350 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene68473.t1 Aspi01Gene68473 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.04G039400.1 Ceric.04G039400 not classified & original description: pacid=50630851... 0.03 OrthoFinder output from all 47 species
Ceric.22G031800.1 Ceric.22G031800 not classified & original description: pacid=50614819... 0.02 OrthoFinder output from all 47 species
Ceric.25G006400.1 BPS1, Ceric.25G006400 not classified & original description: pacid=50594262... 0.03 OrthoFinder output from all 47 species
Ceric.25G006500.1 Ceric.25G006500 not classified & original description: pacid=50594057... 0.03 OrthoFinder output from all 47 species
Ceric.28G046900.1 Ceric.28G046900 not classified & original description: pacid=50570300... 0.02 OrthoFinder output from all 47 species
Dac_g13361 BPS1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g15225 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g02475 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g04785 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g19319 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_06674 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Gb_18309 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os11g06440.1 LOC_Os11g06440 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_130577g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_52232g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g11031 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g48226 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g01034 BPS1 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g27152 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g31153 BPS1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g04451 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc04g071480.1.1 Solyc04g071480 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Spa_g07215 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g09588 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g38783 BPS1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g02494 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e009073_P001 Zm00001e009073 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Zm00001e024656_P001 Zm00001e024656 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0048364 root development IEA Interproscan
BP GO:0048367 shoot system development IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
CC GO:0000786 nucleosome IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0005996 monosaccharide metabolic process IEP HCCA
BP GO:0006006 glucose metabolic process IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0006914 autophagy IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0019318 hexose metabolic process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0031072 heat shock protein binding IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
CC GO:0032993 protein-DNA complex IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
MF GO:0050661 NADP binding IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0061919 process utilizing autophagic mechanism IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR004320 BPS1_pln 93 310
No external refs found!