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  5. Pir_g22303

Pir_g22303


Description : not classified & original description: none


Gene families : OG0000143 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000143_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g22303
Cluster HCCA: Cluster_32

Target Alias Description ECC score Gene Family Method Actions
AT1G12030 No alias Protein of unknown function (DUF506) 0.04 OrthoFinder output from all 47 species
AT2G39650 No alias Protein of unknown function (DUF506) 0.03 OrthoFinder output from all 47 species
Aev_g02070 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g03142 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g39548 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g01926 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g15434 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g12716 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01006248001 No alias No description available 0.04 OrthoFinder output from all 47 species
GSVIVT01016558001 No alias No description available 0.04 OrthoFinder output from all 47 species
Len_g16439 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g23446 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_949779g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Pir_g20412 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0055.g014461 No alias not classified & original description: CDS=1-1647 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0106.g020224 No alias not classified & original description: CDS=806-2086 0.02 OrthoFinder output from all 47 species
Sam_g11927 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g47873 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc02g078160.3.1 Solyc02g078160 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc06g005480.3.1 Solyc06g005480 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Spa_g16454 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e000474_P001 Zm00001e000474 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e004776_P001 Zm00001e004776 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e005992_P006 Zm00001e005992 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e023428_P001 Zm00001e023428 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
CC GO:0005839 proteasome core complex IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0043531 ADP binding IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR006502 PDDEXK-like 86 304
No external refs found!