1. Home
  2. Species
  3. Pleocnemia irregularis
  4. Sequence
  5. Pir_g23816

Pir_g23816 (AtMYB20, MYB20)


Aliases : AtMYB20, MYB20

Description : MYB class-R2R3 transcription factor & original description: none


Gene families : OG0000015 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g23816

Target Alias Description ECC score Gene Family Method Actions
AT1G18570 AtMYB51, BW51B,... myb domain protein 51 0.01 OrthoFinder output from all 47 species
AT4G34990 MYB32, AtMYB32 myb domain protein 32 0.01 OrthoFinder output from all 47 species
Adi_g107873 MYB43, AtMYB43 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s0004.g008455 ATMYB101, MYB101, ATM1 MYB class-R2R3 subgroup-18 transcription factor &... 0.03 OrthoFinder output from all 47 species
GSVIVT01025034001 ATMYB59-1,... RNA biosynthesis.transcriptional activation.MYB... 0.01 OrthoFinder output from all 47 species
LOC_Os01g59660.1 MYB33, ATMYB33,... transcription factor (MYB) 0.01 OrthoFinder output from all 47 species
MA_14061g0010 MYB36, AtMYB36 transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
MA_158319g0010 MYB103, AtMYB103 transcription factor (MYB) 0.01 OrthoFinder output from all 47 species
MA_162812g0020 ATMYB5, MYB5 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_1850812g0010 No alias no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
MA_31666g0010 ATMYB4, MYB4 transcription factor (MYB) 0.01 OrthoFinder output from all 47 species
MA_37256g0010 ATY53, ATMYB67, MYB67 transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
MA_460508g0010 ATMYB14, MYB14, MYB14AT transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
MA_492415g0010 No alias no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
MA_7665446g0010 ATMYB5, MYB5 transcription factor (MYB) 0.01 OrthoFinder output from all 47 species
MA_8464929g0010 No alias no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
MA_9476g0040 MYB8, HOS10 Transcription factor MYB3 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Solyc04g014470.3.1 AtMYB20, MYB20,... transcription factor (MYB) 0.06 OrthoFinder output from all 47 species
Solyc04g074170.3.1 AtMYB93, MYB93,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Solyc06g005330.3.1 ATMYB48-1,... transcription factor (MYB) 0.05 OrthoFinder output from all 47 species
Solyc06g074920.3.1 MYB36, AtMYB36,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Solyc10g005460.3.1 ATMYB102, ATM4,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
Zm00001e001492_P001 BOS1, AtMYB108,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
Zm00001e029600_P001 ATMYB59-1,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Zm00001e029601_P001 ATMYB59-1,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
Zm00001e035993_P001 MYB7, ATY49,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
InterPro domains Description Start Stop
IPR001005 SANT/Myb 71 111
IPR001005 SANT/Myb 14 61
No external refs found!