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  5. Pir_g25028

Pir_g25028


Description : subgroup ERF-VI transcription factor & original description: none


Gene families : OG0000003 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g25028
Cluster HCCA: Cluster_101

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00056p00064760 TINY2,... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.04 OrthoFinder output from all 47 species
AT1G53170 ATERF8, ATERF-8, ERF8 ethylene response factor 8 0.02 OrthoFinder output from all 47 species
AT1G63030 ddf2 Integrase-type DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
AT2G40350 No alias Integrase-type DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
AT5G25390 SHN2 Integrase-type DNA-binding superfamily protein 0.04 OrthoFinder output from all 47 species
Adi_g056044 ERF110 subgroup ERF-X transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g057545 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g11527 TINY2 subgroup ERF-III transcription factor & original... 0.04 OrthoFinder output from all 47 species
Als_g37025 DEAR3 subgroup ERF-II transcription factor *(ERF16/17/18) &... 0.03 OrthoFinder output from all 47 species
Als_g37045 No alias cutin and suberin biosynthesis transcription factor... 0.03 OrthoFinder output from all 47 species
Als_g38509 WIN1, SHN1 subgroup ERF-V transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g36093 HRE2 transcription factor component *(HRE/RAP2.12) of... 0.04 OrthoFinder output from all 47 species
Azfi_s0002.g001536 ATERF12, ERF12 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Cba_g08443 WIN1, SHN1 cutin and suberin biosynthesis transcription factor... 0.03 OrthoFinder output from all 47 species
Cba_g26938 HRE2 transcription factor component *(HRE/RAP2.12) of... 0.03 OrthoFinder output from all 47 species
Ceric.03G024500.1 tny, Ceric.03G024500 subgroup ERF-III transcription factor & original... 0.04 OrthoFinder output from all 47 species
Ceric.38G045600.1 Ceric.38G045600 subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Cre14.g620500 ESR1, DRN No description available 0.02 OrthoFinder output from all 47 species
Dcu_g15103 TINY2 subgroup ERF-III transcription factor & original... 0.04 OrthoFinder output from all 47 species
Ehy_g14006 ATERF-9, ERF9, ATERF9 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ehy_g15133 HRE2 transcription factor component *(HRE/RAP2.12) of... 0.02 OrthoFinder output from all 47 species
Ehy_g26298 ATERF3, ERF3 not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os02g13710.1 TINY2, LOC_Os02g13710 transcription factor (DREB) 0.04 OrthoFinder output from all 47 species
LOC_Os03g15660.1 DREB26, LOC_Os03g15660 Ethylene-responsive transcription factor ERF012... 0.03 OrthoFinder output from all 47 species
LOC_Os05g28350.1 ABI4, SAN5,... transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
LOC_Os05g36100.1 ERF110, LOC_Os05g36100 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
LOC_Os05g49700.1 LOC_Os05g49700 transcription factor (DREB) 0.04 OrthoFinder output from all 47 species
LOC_Os06g08340.1 LOC_Os06g08340 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
LOC_Os06g36000.1 TINY2, LOC_Os06g36000 transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
LOC_Os06g40150.1 WIN1, SHN1,... transcription factor (ERF). SHN-type cutin and suberin... 0.04 OrthoFinder output from all 47 species
LOC_Os09g39850.1 ERF1, ATERF1,... transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Len_g10943 ATERF12, ERF12 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Lfl_g06554 DEAR1, CEJ1, ATERF#011 subgroup ERF-II transcription factor *(ERF19/20) &... 0.03 OrthoFinder output from all 47 species
Lfl_g31233 RAP2.12 transcription factor component *(HRE/RAP2.12) of... 0.03 OrthoFinder output from all 47 species
MA_10266433g0010 ERF-1, ATERF-1 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
MA_3758g0010 No alias Ethylene-responsive transcription factor ERF013... 0.02 OrthoFinder output from all 47 species
MA_411387g0010 ERF2, ATERF2, ATERF-2 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
MA_65877g0010 No alias Dehydration-responsive element-binding protein 3... 0.03 OrthoFinder output from all 47 species
MA_83118g0010 No alias transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
Mp6g08690.1 TINY2 transcription factor (DREB) 0.05 OrthoFinder output from all 47 species
Nbi_g02035 TINY2 subgroup ERF-III transcription factor & original... 0.04 OrthoFinder output from all 47 species
Ore_g21499 No alias cutin and suberin biosynthesis transcription factor... 0.03 OrthoFinder output from all 47 species
Ore_g28444 ATERF12, ERF12 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g01623 No alias subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Pir_g21797 ERF-1, ATERF-1 subgroup ERF-IX transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g37924 ERF110 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g48776 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g02451 HRE2 subgroup ERF-VI transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g10334 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g26646 RAP2.2 transcription factor component *(HRE/RAP2.12) of... 0.03 OrthoFinder output from all 47 species
Pnu_g32187 No alias subgroup ERF-IV/DREB2 transcription factor & original... 0.03 OrthoFinder output from all 47 species
Pnu_g33218 No alias subgroup ERF-I transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0039.g012223 ERF7, ATERF7, ATERF-7 subgroup ERF-VIII transcription factor & original... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0046.g013375 HRE2 transcription factor component *(HRE/RAP2.12) of... 0.03 OrthoFinder output from all 47 species
Solyc01g090370.3.1 ATERF13, ERF13,... transcription factor (ERF) 0.05 OrthoFinder output from all 47 species
Solyc01g090560.4.1 Solyc01g090560 transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
Solyc03g005500.1.1 ERF14, ATERF14,... transcription factor (ERF). transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
Solyc03g093610.1.1 ERF-1, ATERF-1,... transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Solyc05g050790.3.1 ATERF13, ERF13,... transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Solyc05g050830.3.1 Solyc05g050830 transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
Solyc05g051180.3.1 ERF1, ATERF1,... transcription factor (ERF) 0.05 OrthoFinder output from all 47 species
Solyc08g007840.3.1 Solyc08g007840 transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
Solyc09g091950.1.1 Solyc09g091950 transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
Spa_g30191 No alias subgroup ERF-I transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g42044 RAP2.11 transcription factor *(ERN1) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g52658 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g26947 RAP2.2 transcription factor component *(HRE/RAP2.12) of... 0.03 OrthoFinder output from all 47 species
Zm00001e000609_P001 RAP2.2, Zm00001e000609 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Zm00001e014415_P001 TINY2, Zm00001e014415 transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
Zm00001e030090_P001 DEAR3, Zm00001e030090 transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
Zm00001e032483_P001 Zm00001e032483 transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
Zm00001e033537_P001 ERF1, ATERF1,... transcription factor (ERF) 0.04 OrthoFinder output from all 47 species
Zm00001e034242_P001 RAP2.12, Zm00001e034242 transcription factor (ERF) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008962 phosphatidylglycerophosphatase activity IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
MF GO:0050661 NADP binding IEP HCCA
MF GO:0051087 chaperone binding IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
MF GO:0070402 NADPH binding IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 122 169
No external refs found!