Description : E3 ubiquitin ligase & original description: none
Gene families : OG0000484 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000484_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Pir_g26175 | |
| Cluster | HCCA: Cluster_116 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00009p00253970 | evm_27.TU.AmTr_v1... | No description available | 0.05 | OrthoFinder output from all 47 species | |
| AT5G01070 | No alias | RING/FYVE/PHD zinc finger superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
| AT5G59000 | No alias | RING/FYVE/PHD zinc finger superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| Als_g12344 | No alias | E3 ubiquitin ligase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g33017 | No alias | E3 ubiquitin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene07741.t1 | Aspi01Gene07741 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene07744.t1 | Aspi01Gene07744 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene69361.t1 | Aspi01Gene69361 | E3 ubiquitin ligase & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Dcu_g16777 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01020801001 | No alias | Protein degradation.peptide tagging.Ubiquitin... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01025673001 | No alias | Protein degradation.peptide tagging.Ubiquitin... | 0.02 | OrthoFinder output from all 47 species | |
| MA_10436661g0020 | No alias | RING-v-class E3 ligase | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g00704 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g48723 | No alias | E3 ubiquitin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0092.g018968 | No alias | bHLH-type transcription factor & original description: CDS=1-675 | 0.03 | OrthoFinder output from all 47 species | |
| Solyc11g069350.2.1 | Solyc11g069350 | RING-v-class E3 ligase | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e012977_P001 | Zm00001e012977 | RING-v-class E3 ligase | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e040499_P001 | Zm00001e040499 | RING-v-class E3 ligase | 0.05 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0008270 | zinc ion binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004175 | endopeptidase activity | IEP | HCCA |
| MF | GO:0004190 | aspartic-type endopeptidase activity | IEP | HCCA |
| MF | GO:0004222 | metalloendopeptidase activity | IEP | HCCA |
| BP | GO:0006508 | proteolysis | IEP | HCCA |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0006835 | dicarboxylic acid transport | IEP | HCCA |
| BP | GO:0008150 | biological_process | IEP | HCCA |
| MF | GO:0008233 | peptidase activity | IEP | HCCA |
| MF | GO:0008237 | metallopeptidase activity | IEP | HCCA |
| BP | GO:0008612 | peptidyl-lysine modification to peptidyl-hypusine | IEP | HCCA |
| MF | GO:0010309 | acireductone dioxygenase [iron(II)-requiring] activity | IEP | HCCA |
| BP | GO:0015711 | organic anion transport | IEP | HCCA |
| BP | GO:0015740 | C4-dicarboxylate transport | IEP | HCCA |
| BP | GO:0015743 | malate transport | IEP | HCCA |
| BP | GO:0015849 | organic acid transport | IEP | HCCA |
| BP | GO:0016485 | protein processing | IEP | HCCA |
| MF | GO:0016701 | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen | IEP | HCCA |
| MF | GO:0016702 | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen | IEP | HCCA |
| MF | GO:0016872 | intramolecular lyase activity | IEP | HCCA |
| BP | GO:0018193 | peptidyl-amino acid modification | IEP | HCCA |
| BP | GO:0018205 | peptidyl-lysine modification | IEP | HCCA |
| BP | GO:0019538 | protein metabolic process | IEP | HCCA |
| BP | GO:0030001 | metal ion transport | IEP | HCCA |
| BP | GO:0036211 | protein modification process | IEP | HCCA |
| BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
| BP | GO:0043412 | macromolecule modification | IEP | HCCA |
| BP | GO:0044238 | primary metabolic process | IEP | HCCA |
| MF | GO:0046873 | metal ion transmembrane transporter activity | IEP | HCCA |
| BP | GO:0046942 | carboxylic acid transport | IEP | HCCA |
| MF | GO:0051213 | dioxygenase activity | IEP | HCCA |
| BP | GO:0051604 | protein maturation | IEP | HCCA |
| MF | GO:0070001 | aspartic-type peptidase activity | IEP | HCCA |
| BP | GO:0071586 | CAAX-box protein processing | IEP | HCCA |
| BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
| MF | GO:0140096 | catalytic activity, acting on a protein | IEP | HCCA |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR011016 | Znf_RING-CH | 214 | 260 |
| No external refs found! |
