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  5. Pir_g26270

Pir_g26270 (BRIZ2)


Aliases : BRIZ2

Description : E3 ubiquitin ligase *(BRIZ) & original description: none


Gene families : OG0004050 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004050_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g26270

Target Alias Description ECC score Gene Family Method Actions
Dac_g00860 BRIZ2 E3 ubiquitin ligase *(BRIZ) & original description: none 0.03 OrthoFinder output from all 47 species
MA_2413g0010 BRIZ2 no description available(sp|o80996|briz2_arath : 127.0) 0.02 OrthoFinder output from all 47 species
Sam_g28593 No alias E3 ubiquitin ligase *(BRIZ) & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g03371 BRIZ2 E3 ubiquiTin ligase *(BRIZ) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
BP GO:0017038 protein import IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0030490 maturation of SSU-rRNA IEP HCCA
MF GO:0030515 snoRNA binding IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR011422 BRAP2/ETP1_RRM 95 189
IPR001841 Znf_RING 203 244
IPR001607 Znf_UBP 255 314
No external refs found!