Pir_g26459 (ABCB19, ATABCB19,...)

Aliases : ABCB19, ATABCB19, MDR1, MDR11, ATPGP19, ATMDR1, ATMDR11, PGP19

Description : subfamily ABCB transporter & original description: none

Gene families : OG0000048 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Pir_g26459

Target	Alias	Description	ECC score	Gene Family Method
AT3G62150	PGP21	P-glycoprotein 21	0.02	OrthoFinder output from all 47 species
Adi_g060981	ABCB19,...	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Ala_g21203	ABCB19,...	subfamily ABCB transporter & original description: none	0.04	OrthoFinder output from all 47 species
Als_g18811	PGP11	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Als_g22635	ABCB19,...	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Als_g51333	ABCB19,...	subfamily ABCB transporter & original description: none	0.01	OrthoFinder output from all 47 species
Aspi01Gene20592.t1	PGP6, Aspi01Gene20592	subfamily ABCB transporter & original description: none	0.01	OrthoFinder output from all 47 species
Aspi01Gene28299.t1	Aspi01Gene28299	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene43896.t1	PGP6, Aspi01Gene43896	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene45615.t1	PGP11, Aspi01Gene45615	subfamily ABCB transporter & original description: none	0.01	OrthoFinder output from all 47 species
Azfi_s0203.g057675	ABCB19,...	subfamily ABCB transporter & original description: CDS=1-3912	0.03	OrthoFinder output from all 47 species
Ceric.1Z238200.1	Ceric.1Z238200	subfamily ABCB transporter & original description:...	0.02	OrthoFinder output from all 47 species
Ceric.36G048300.1	Ceric.36G048300	subfamily ABCB transporter & original description:...	0.02	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00020952.7	PGP2	ABC transporter B family member 2 OS=Arabidopsis thaliana	0.01	OrthoFinder output from all 47 species
Dac_g07802	PGP11	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Dcu_g03201	ABCB19,...	subfamily ABCB transporter & original description: none	0.01	OrthoFinder output from all 47 species
Dcu_g08511	PGP11	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Dde_g00972	ABCB19,...	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g02960	PGP13	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g09264	PGP20	subfamily ABCB transporter & original description: none	0.01	OrthoFinder output from all 47 species
Ehy_g13730	No alias	subfamily ABCB transporter & original description: none	0.01	OrthoFinder output from all 47 species
Ehy_g20264	No alias	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g21294	ABCB19,...	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g28462	PGP2	subfamily ABCB transporter & original description: none	0.01	OrthoFinder output from all 47 species
LOC_Os01g50100.1	PGP11, LOC_Os01g50100	subfamily ABCB transporter	0.03	OrthoFinder output from all 47 species
Len_g02924	PGP2	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Len_g04845	PGP20	subfamily ABCB transporter & original description: none	0.01	OrthoFinder output from all 47 species
Lfl_g10739	ABCB19,...	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Lfl_g16090	ABCB19,...	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
MA_10432922g0010	No alias	subfamily ABCB transporter	0.01	OrthoFinder output from all 47 species
MA_6958g0010	PGP21	ABC transporter B family member 21 OS=Arabidopsis...	0.2	OrthoFinder output from all 47 species
Mp2g02910.1	ABCB19,...	auxin efflux transporter (ABCB19). subfamily ABCB transporter	0.02	OrthoFinder output from all 47 species
Mp2g11920.1	ABCB19,...	subfamily ABCB transporter	0.01	OrthoFinder output from all 47 species
Mp3g11830.1	ABCB19,...	auxin efflux transporter (ABCB19). subfamily ABCB transporter	0.01	OrthoFinder output from all 47 species
Mp4g07450.1	ABCB19,...	subfamily ABCB transporter	0.01	OrthoFinder output from all 47 species
Mp5g17400.1	ABCB19,...	subfamily ABCB transporter	0.01	OrthoFinder output from all 47 species
Mpzg01120.1	No alias	no hits & (original description: none)	0.01	OrthoFinder output from all 47 species
Msp_g13353	PGP13	subfamily ABCB transporter & original description: none	0.01	OrthoFinder output from all 47 species
Nbi_g02494	PGP2	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Nbi_g18266	ABCB19,...	subfamily ABCB transporter & original description: none	0.01	OrthoFinder output from all 47 species
Nbi_g29613	PGP11	subfamily ABCB transporter & original description: none	0.01	OrthoFinder output from all 47 species
Ore_g04820	PGP20	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Pnu_g19681	PGP2	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g03992	ABCB19,...	subfamily ABCB transporter & original description: none	0.01	OrthoFinder output from all 47 species
Sacu_v1.1_s0030.g010416	ABCB19,...	subfamily ABCB transporter & original description: CDS=327-1289	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0054.g014291	PGP2	subfamily ABCB transporter & original description: CDS=1-4248	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0055.g014489	PGP6	subfamily ABCB transporter & original description: CDS=1-4245	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0111.g020710	ABCB19,...	not classified & original description: CDS=1-1380	0.02	OrthoFinder output from all 47 species
Smo92485	ABCB19,...	Solute transport.primary active transport.ABC...	0.01	OrthoFinder output from all 47 species
Solyc06g009290.4.1	PGP21, Solyc06g009290	subfamily ABCB transporter	0.01	OrthoFinder output from all 47 species
Spa_g40340	ABCB19,...	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Tin_g06138	PGP6	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e028117_P001	PGP11, Zm00001e028117	subfamily ABCB transporter	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0015399	primary active transmembrane transporter activity	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0022804	active transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0042626	ATPase-coupled transmembrane transporter activity	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140359	ABC-type transporter activity	IEA	Interproscan
MF	GO:0140657	ATP-dependent activity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR003439	ABC_transporter-like_ATP-bd	193	341
IPR011527	ABC1_TM_dom	1	124
IPR011527	ABC1_TM_dom	512	781

External Links

No external refs found!

Pir_g26459 (ABCB19, ATABCB19,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation