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  5. Pir_g27236

Pir_g27236


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g27236

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00039p00130050 evm_27.TU.AmTr_v1... Putative pentatricopeptide repeat-containing protein... 0.04 OrthoFinder output from all 47 species
AMTR_s00088p00046850 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.03 OrthoFinder output from all 47 species
AT4G01030 No alias pentatricopeptide (PPR) repeat-containing protein 0.02 OrthoFinder output from all 47 species
AT4G18840 No alias Pentatricopeptide repeat (PPR-like) superfamily protein 0.04 OrthoFinder output from all 47 species
AT5G59200 OTP80 Tetratricopeptide repeat (TPR)-like superfamily protein 0.07 OrthoFinder output from all 47 species
Adi_g059409 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g06600 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g05747 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g06520 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g06621 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g20391 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g27542 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g28195 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g36880 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g02808 REME1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene14821.t1 CRR2, Aspi01Gene14821 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene29787.t2 Aspi01Gene29787 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene30532.t1 Aspi01Gene30532 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene68766.t1 Aspi01Gene68766 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0001.g000396 No alias not classified & original description: CDS=1-2745 0.03 OrthoFinder output from all 47 species
Azfi_s0028.g023821 No alias not classified & original description: CDS=1-2478 0.05 OrthoFinder output from all 47 species
Azfi_s0040.g026628 No alias not classified & original description: CDS=1-2499 0.02 OrthoFinder output from all 47 species
Azfi_s0045.g030112 No alias not classified & original description: CDS=94-318 0.06 OrthoFinder output from all 47 species
Azfi_s0048.g030525 No alias not classified & original description: CDS=1-2520 0.04 OrthoFinder output from all 47 species
Azfi_s0099.g044007 REME1 not classified & original description: CDS=1-1401 0.04 OrthoFinder output from all 47 species
Azfi_s0102.g044571 No alias not classified & original description: CDS=1-2829 0.04 OrthoFinder output from all 47 species
Azfi_s0109.g045373 No alias not classified & original description: CDS=1-2985 0.05 OrthoFinder output from all 47 species
Cba_g07092 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g15366 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g34541 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.25G042100.1 Ceric.25G042100 not classified & original description: pacid=50593153... 0.04 OrthoFinder output from all 47 species
Dac_g28151 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g30474 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g35266 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g03759 OSB3 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g07839 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g13236 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g19509 OTP82 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g26389 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01003804001 CRR22 Pentatricopeptide repeat-containing protein At5g16860... 0.03 OrthoFinder output from all 47 species
GSVIVT01036975001 EMB2758 Pentatricopeptide repeat-containing protein At4g33990... 0.04 OrthoFinder output from all 47 species
Gb_05488 No alias Pentatricopeptide repeat-containing protein At2g22070... 0.04 OrthoFinder output from all 47 species
Gb_33328 CRR22 Pentatricopeptide repeat-containing protein At4g13650... 0.04 OrthoFinder output from all 47 species
Gb_33726 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.05 OrthoFinder output from all 47 species
LOC_Os01g60250.1 LOC_Os01g60250 Pentatricopeptide repeat-containing protein At3g14730... 0.03 OrthoFinder output from all 47 species
LOC_Os04g02850.1 OTP84, LOC_Os04g02850 RNA editing factor (OTP84) 0.03 OrthoFinder output from all 47 species
LOC_Os06g40860.1 LOC_Os06g40860 Pentatricopeptide repeat-containing protein At1g03540... 0.03 OrthoFinder output from all 47 species
LOC_Os07g07620.1 emb1899, EMB175,... Pentatricopeptide repeat-containing protein At5g03800... 0.03 OrthoFinder output from all 47 species
LOC_Os07g20420.1 LOC_Os07g20420 Pentatricopeptide repeat-containing protein At3g26782,... 0.03 OrthoFinder output from all 47 species
LOC_Os08g13990.1 LOC_Os08g13990 Pentatricopeptide repeat-containing protein At2g37320... 0.04 OrthoFinder output from all 47 species
LOC_Os11g29360.1 OTP82, LOC_Os11g29360 Pentatricopeptide repeat-containing protein At5g66520... 0.02 OrthoFinder output from all 47 species
Lfl_g06094 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07847 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g35606 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_8893194g0010 MEF1 RNA editing factor (MEF1) 0.06 OrthoFinder output from all 47 species
Msp_g04529 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g14419 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g17431 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g18639 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g20742 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g31458 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g40811 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Nbi_g13680 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g28389 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g32824 OSB3 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g33886 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g37271 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g41725 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g37149 OSB1 ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g07437 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g12723 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g43570 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g57466 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0040.g012385 No alias not classified & original description: CDS=1-1908 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0110.g020628 No alias not classified & original description: CDS=1-699 0.04 OrthoFinder output from all 47 species
Sam_g13068 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g30281 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g17792 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e005246_P001 Zm00001e005246 Pentatricopeptide repeat-containing protein At2g41080... 0.04 OrthoFinder output from all 47 species
Zm00001e011467_P004 emb1899, EMB175,... Pentatricopeptide repeat-containing protein At5g03800... 0.03 OrthoFinder output from all 47 species
Zm00001e030553_P001 Zm00001e030553 Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR032867 DYW_dom 77 161
No external refs found!