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  5. Pir_g27284

Pir_g27284


Description : not classified & original description: none


Gene families : OG0003721 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003721_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g27284
Cluster HCCA: Cluster_116

Target Alias Description ECC score Gene Family Method Actions
AT4G11655 No alias Uncharacterised protein family (UPF0497) 0.04 OrthoFinder output from all 47 species
Aev_g02860 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01016570001 No alias CASP-like protein 4C1 OS=Ricinus communis 0.03 OrthoFinder output from all 47 species
GSVIVT01030259001 No alias CASP-like protein 4B1 OS=Arabidopsis lyrata subsp. lyrata 0.03 OrthoFinder output from all 47 species
GSVIVT01032477001 No alias CASP-like protein 4A3 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
LOC_Os05g27790.1 LOC_Os05g27790 CASP-like protein 4B4 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
Ore_g23739 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc08g080560.3.1 Solyc08g080560 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc09g014993.1.1 Solyc09g014993 CASP-like protein 4B1 OS=Arabidopsis lyrata subsp.... 0.02 OrthoFinder output from all 47 species
Zm00001e038388_P001 Zm00001e038388 CASP-like protein 4B1 OS=Sorghum bicolor... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
MF GO:0005546 phosphatidylinositol-4,5-bisphosphate binding IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006887 exocytosis IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
MF GO:0010309 acireductone dioxygenase [iron(II)-requiring] activity IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015276 ligand-gated monoatomic ion channel activity IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
MF GO:0022834 ligand-gated channel activity IEP HCCA
MF GO:0022836 gated channel activity IEP HCCA
MF GO:0022839 monoatomic ion gated channel activity IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0032940 secretion by cell IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
BP GO:0046903 secretion IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:0140352 export from cell IEP HCCA
MF GO:1901981 phosphatidylinositol phosphate binding IEP HCCA
MF GO:1902936 phosphatidylinositol bisphosphate binding IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR006702 CASP_dom 168 300
No external refs found!