Pir_g28224 (EXP15, ATEXPA15,...)


Aliases : EXP15, ATEXPA15, ATHEXP ALPHA 1.3, ATEXP15, EXPA15

Description : alpha-class expansin & original description: none


Gene families : OG0000032 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g28224

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00270650 ATEXPA11, ATHEXP... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.04 OrthoFinder output from all 47 species
AMTR_s00002p00146900 ATHEXP BETA 3.1,... Cell wall.cell wall proteins.expansins.beta-like-type expansin 0.02 OrthoFinder output from all 47 species
AMTR_s00002p00195390 ATHEXP BETA 3.1,... Cell wall.cell wall proteins.expansins.beta-like-type expansin 0.02 OrthoFinder output from all 47 species
AMTR_s00010p00264980 ATEXPA1, EXP1,... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.03 OrthoFinder output from all 47 species
AMTR_s00012p00230920 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.03 OrthoFinder output from all 47 species
AT2G28950 EXPA6, ATEXP6,... expansin A6 0.05 OrthoFinder output from all 47 species
AT3G45960 ATEXLA3, EXPL3,... expansin-like A3 0.06 OrthoFinder output from all 47 species
AT5G39260 EXPA21, EXP21,... expansin A21 0.03 OrthoFinder output from all 47 species
AT5G39300 ATEXPA25,... expansin A25 0.02 OrthoFinder output from all 47 species
Aev_g18902 EXPA16, ATHEXP... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g16199 ATEXPA10,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g32738 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.04 OrthoFinder output from all 47 species
Als_g12167 ATEXPA10,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Als_g14978 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Als_g15152 EXPB3, ATEXPB3,... not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g40485 ATEXPA10,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Als_g52112 EXP9, EXPA9,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g35135 ATEXPA1, EXP1,... alpha-class expansin & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g41940 ATEXP14, EXPA14,... alpha-class expansin & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g58865 ATHEXP BETA 1.4,... not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene40020.t1 ATEXPA10,... alpha-class expansin & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene41819.t1 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g10144 EXPA2, ATHEXP... alpha-class expansin & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.10G048600.1 EXP15, ATEXPA15,... alpha-class expansin & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.25G024500.1 EXPA16, ATHEXP... alpha-class expansin & original description:... 0.02 OrthoFinder output from all 47 species
Dac_g16853 ATEXPA10,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g27229 ATEXPA10,... alpha-class expansin & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g02316 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g25635 ATEXPA10,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g26026 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g30034 ATEXPA4, ATEXP4,... alpha-class expansin & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g34602 ATEXPA10,... alpha-class expansin & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01004469001 No alias Expansin-like B1 OS=Arabidopsis thaliana 0.07 OrthoFinder output from all 47 species
GSVIVT01024572001 EXPA8, ATHEXP... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.03 OrthoFinder output from all 47 species
GSVIVT01025509001 ATEXPA10,... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.04 OrthoFinder output from all 47 species
GSVIVT01032681001 EXPA8, ATHEXP... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.03 OrthoFinder output from all 47 species
GSVIVT01032935001 ATHEXP ALPHA ... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.03 OrthoFinder output from all 47 species
Gb_04404 EXP15, ATEXPA15,... alpha-class expansin 0.02 OrthoFinder output from all 47 species
LOC_Os02g44108.1 ATHEXP BETA 1.4,... Expansin-B11 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
LOC_Os03g06060.1 ATEXPA11, ATHEXP... alpha-class expansin 0.03 OrthoFinder output from all 47 species
LOC_Os06g41700.1 ATEXPA20,... alpha-class expansin 0.03 OrthoFinder output from all 47 species
LOC_Os06g50960.1 ATEXPL2, EXPL2,... Expansin-like A4 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
LOC_Os10g40720.1 ATHEXP BETA 1.4,... Expansin-B3 OS=Oryza sativa subsp. japonica... 0.04 OrthoFinder output from all 47 species
Len_g22797 ATEXPA10,... alpha-class expansin & original description: none 0.08 OrthoFinder output from all 47 species
Len_g36480 ATEXPA1, EXP1,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Len_g40078 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Len_g46726 ATEXPA10,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Len_g57716 EXP15, ATEXPA15,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g18203 EXPA16, ATHEXP... alpha-class expansin & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g25335 ATEXPA10,... alpha-class expansin & original description: none 0.06 OrthoFinder output from all 47 species
Lfl_g29406 ATEXPA4, ATEXP4,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g38162 ATEXPA10,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
MA_201510g0010 ATEXPL2, EXPL2,... alpha-like-class expansin. beta-like-class expansin 0.06 OrthoFinder output from all 47 species
Mp1g22700.1 EXP15, ATEXPA15,... alpha-class expansin 0.03 OrthoFinder output from all 47 species
Mp3g09770.1 ATEXPA1, EXP1,... alpha-class expansin 0.03 OrthoFinder output from all 47 species
Mp3g24470.1 ATEXPA1, EXP1,... alpha-class expansin 0.02 OrthoFinder output from all 47 species
Mp8g18860.1 ATEXPA4, ATEXP4,... alpha-class expansin 0.02 OrthoFinder output from all 47 species
Msp_g30638 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.07 OrthoFinder output from all 47 species
Msp_g37792 ATHEXP BETA 1.4,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g24717 ATEXPA10,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g36666 ATEXPA3, EXP3,... alpha-class expansin & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g20453 ATEXPA10,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g34219 ATEXPA3, EXP3,... alpha-class expansin & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g05687 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g06275 ATEXPA10,... alpha-class expansin & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g19759 EXPA16, ATHEXP... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g24739 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g30057 ATEXPA3, EXP3,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g30591 EXPA16, ATHEXP... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g31444 EXPA16, ATHEXP... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0014.g006211 ATEXPA4, ATEXP4,... alpha-class expansin & original description: CDS=682-1482 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0015.g006536 ATEXPA10,... alpha-class expansin & original description: CDS=1521-2813 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0028.g009901 ATEXPA10,... alpha-class expansin & original description: CDS=444-1193 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0132.g022152 EXPB3, ATEXPB3,... not classified & original description: CDS=169-1023 0.02 OrthoFinder output from all 47 species
Smo179212 ATEXPA10,... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.05 OrthoFinder output from all 47 species
Smo231226 ATEXPA10,... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.04 OrthoFinder output from all 47 species
Smo91129 EXP15, ATEXPA15,... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.04 OrthoFinder output from all 47 species
Solyc03g115270.3.1 ATHEXP ALPHA ... alpha-class expansin 0.04 OrthoFinder output from all 47 species
Solyc05g052250.3.1 EXPA8, ATHEXP... alpha-class expansin 0.04 OrthoFinder output from all 47 species
Solyc06g060970.2.1 ATHEXP BETA 3.1,... beta-like-class expansin 0.03 OrthoFinder output from all 47 species
Solyc12g089380.2.1 ATEXPA11, ATHEXP... alpha-class expansin 0.04 OrthoFinder output from all 47 species
Spa_g09301 ATEXPA10,... alpha-class expansin & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g10234 ATEXPA10,... alpha-class expansin & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g17657 ATEXPA10,... alpha-class expansin & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g37473 EXPA8, ATHEXP... alpha-class expansin & original description: none 0.07 OrthoFinder output from all 47 species
Spa_g40846 ATEXPA4, ATEXP4,... alpha-class expansin & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g03797 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g05844 ATEXPA10,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g06848 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g13994 ATEXPA10,... alpha-class expansin & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g14286 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g14482 ATEXPA10,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g30407 ATEXPA1, EXP1,... alpha-class expansin & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g32125 ATEXPA1, EXP1,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e000038_P001 ATHEXP BETA 1.4,... Expansin-B7 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
Zm00001e004716_P001 ATEXPA11, ATHEXP... alpha-class expansin 0.03 OrthoFinder output from all 47 species
Zm00001e011741_P001 ATEXPA4, ATEXP4,... alpha-class expansin 0.03 OrthoFinder output from all 47 species
Zm00001e015230_P001 EXPB3, ATEXPB3,... beta-class expansin 0.03 OrthoFinder output from all 47 species
Zm00001e037877_P001 ATHEXP BETA 1.4,... Expansin-B4 OS=Oryza sativa subsp. japonica... 0.04 OrthoFinder output from all 47 species
Zm00001e040578_P001 ATEXPA11, ATHEXP... alpha-class expansin 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR007117 Expansin_CBD 179 256
IPR009009 RlpA-like_DPBB 80 168
No external refs found!