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  5. Pir_g28386

Pir_g28386


Description : transcriptional co-activator *(FBH) & original description: none


Gene families : OG0000019 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g28386

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00013p00245920 evm_27.TU.AmTr_v1... External stimuli response.light.UV-A/blue... 0.02 OrthoFinder output from all 47 species
AMTR_s00046p00066610 SPT,... RNA biosynthesis.transcriptional activation.bHLH... 0.03 OrthoFinder output from all 47 species
AT2G42300 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.01 OrthoFinder output from all 47 species
Adi_g059845 SPT bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Als_g14321 No alias bHLH-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene35709.t2 Aspi01Gene35709 bHLH-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene59376.t1 HEC3, Aspi01Gene59376 bHLH-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene62580.t1 Aspi01Gene62580 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g23589 PIF3, POC1, PAP3 bHLH-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01007914001 PIF7 RNA biosynthesis.transcriptional activation.bHLH... 0.03 OrthoFinder output from all 47 species
GSVIVT01013553001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.01 OrthoFinder output from all 47 species
GSVIVT01025313001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.01 OrthoFinder output from all 47 species
GSVIVT01026056001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.02 OrthoFinder output from all 47 species
GSVIVT01028238001 PIF3, POC1, PAP3 RNA biosynthesis.transcriptional activation.bHLH... 0.02 OrthoFinder output from all 47 species
LOC_Os05g46370.1 LOC_Os05g46370 transcription factor (bHLH) 0.01 OrthoFinder output from all 47 species
LOC_Os07g08440.1 UNE12, LOC_Os07g08440 transcription factor (bHLH) 0.14 OrthoFinder output from all 47 species
Lfl_g06729 SPT bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g01846 LRL3 bHLH-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Nbi_g36138 HEC2 bHLH-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Ore_g08799 No alias bHLH-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Ore_g42033 No alias regulatory protein (CIB) of blue light perception &... 0.02 OrthoFinder output from all 47 species
Pir_g06488 CIB1 regulatory protein (CIB) of blue light perception &... 0.02 OrthoFinder output from all 47 species
Ppi_g32176 RSL2 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g23158 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g22560 SPT bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g13248 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g21762 SPT bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR011598 bHLH_dom 337 383
No external refs found!